RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 NischQ80TM9 1593 aa31.58■■■□□ 2.65
Sqstm1-201ENSMUST00000015981 Abcc9P70170 1546 aa30.7■■■□□ 2.51
Sqstm1-201ENSMUST00000015981 Rtl1Q7M732 1744 aa30.59■■■□□ 2.49
Sqstm1-201ENSMUST00000015981 Gm35339A0A140LHH9 1649 aa30.51■■■□□ 2.48
Sqstm1-201ENSMUST00000015981 Rpgrip1Q9EPQ2 1331 aa30.5■■■□□ 2.47
Sqstm1-201ENSMUST00000015981 Rhox8Q6VSS7 320 aa30.3■■■□□ 2.44
Sqstm1-201ENSMUST00000015981 Ccdc180J3QNE4 1664 aa30.26■■■□□ 2.44
Sqstm1-201ENSMUST00000015981 Abcc8B2RUS7 1588 aa29.72■■■□□ 2.35
Sqstm1-201ENSMUST00000015981 Acin1Q9JIX8 1338 aaKnown RBP29.6■■■□□ 2.33
Sqstm1-201ENSMUST00000015981 Zcchc6Q5BLK4 1491 aaKnown RBP29.27■■■□□ 2.28
Sqstm1-201ENSMUST00000015981 Pcgf6Q99NA9 353 aa28.96■■■□□ 2.23
Sqstm1-201ENSMUST00000015981 Ehmt2Q9Z148 1263 aaKnown RBP28.92■■■□□ 2.22
Sqstm1-201ENSMUST00000015981 Dcaf1Q80TR8 1506 aa28.86■■■□□ 2.21
Sqstm1-201ENSMUST00000015981 HrcG5E8J6 738 aa28.73■■■□□ 2.19
Sqstm1-201ENSMUST00000015981 Trim41Q5NCC3 630 aa28.24■■■□□ 2.11
Sqstm1-201ENSMUST00000015981 Supt5hO55201 1082 aaKnown RBP28.17■■■□□ 2.1
Sqstm1-201ENSMUST00000015981 Ccdc136Q3TVA9 1136 aa27.99■■■□□ 2.07
Sqstm1-201ENSMUST00000015981 Neurod1Q60867 357 aa27.9■■■□□ 2.06
Sqstm1-201ENSMUST00000015981 Rb1cc1Q9ESK9 1588 aa27.75■■■□□ 2.03
Sqstm1-201ENSMUST00000015981 Las1lA2BE28 776 aaKnown RBP27.6■■■□□ 2.01
Sqstm1-201ENSMUST00000015981 Cep164Q5DU05 1446 aa27.59■■■□□ 2.01
Sqstm1-201ENSMUST00000015981 Baz1aO88379 1555 aa27.44■■□□□ 1.98
Sqstm1-201ENSMUST00000015981 Zeb1Q64318 1117 aa27.42■■□□□ 1.98
Sqstm1-201ENSMUST00000015981 NefmP08553 848 aa27.32■■□□□ 1.96
Sqstm1-201ENSMUST00000015981 Cngb1E1AZ71 1325 aa27.27■■□□□ 1.96
Sqstm1-201ENSMUST00000015981 ScribQ80U72 1612 aa27.24■■□□□ 1.95
Sqstm1-201ENSMUST00000015981 Sall2Q9QX96 1004 aa27.19■■□□□ 1.94
Sqstm1-201ENSMUST00000015981 1700123L14RikQ3V2K7 440 aa27.14■■□□□ 1.94
Sqstm1-201ENSMUST00000015981 Anks4bQ8K3X6 423 aa27.14■■□□□ 1.94
Sqstm1-201ENSMUST00000015981 Mier1Q5UAK0 511 aa27.07■■□□□ 1.92
Sqstm1-201ENSMUST00000015981 Csrnp3P59055 597 aa26.98■■□□□ 1.91
Sqstm1-201ENSMUST00000015981 Kdm5dQ62240 1548 aa26.96■■□□□ 1.91
Sqstm1-201ENSMUST00000015981 Smarca2Q6DIC0 1577 aa26.91■■□□□ 1.9
Sqstm1-201ENSMUST00000015981 Rsf1E9PWW9 1441 aaKnown RBP26.88■■□□□ 1.89
Sqstm1-201ENSMUST00000015981 Gab3Q8BSM5 595 aa26.87■■□□□ 1.89
Sqstm1-201ENSMUST00000015981 Chic1Q8CBW7 227 aa26.85■■□□□ 1.89
Sqstm1-201ENSMUST00000015981 Myt1Q8CFC2 1127 aa26.78■■□□□ 1.88
Sqstm1-201ENSMUST00000015981 CenpbP27790 599 aa26.73■■□□□ 1.87
Sqstm1-201ENSMUST00000015981 Crybg2B7ZCC2 1516 aa26.7■■□□□ 1.86
Sqstm1-201ENSMUST00000015981 Aplp2Q06335 707 aa26.69■■□□□ 1.86
Sqstm1-201ENSMUST00000015981 Cdk11bP24788 784 aaKnown RBP26.62■■□□□ 1.85
Sqstm1-201ENSMUST00000015981 Wdr66E9Q743 1299 aa26.59■■□□□ 1.85
Sqstm1-201ENSMUST00000015981 NacadQ5SWP3 1504 aa26.59■■□□□ 1.85
Sqstm1-201ENSMUST00000015981 Aebp2Q9Z248 504 aaKnown RBP26.57■■□□□ 1.84
Sqstm1-201ENSMUST00000015981 Ccdc88bQ4QRL3 1481 aa26.56■■□□□ 1.84
Sqstm1-201ENSMUST00000015981 Nop58Q6DFW4 536 aaKnown RBP26.54■■□□□ 1.84
Sqstm1-201ENSMUST00000015981 ClspnQ80YR7 1315 aa26.49■■□□□ 1.83
Sqstm1-201ENSMUST00000015981 Golga3P55937 1487 aa26.38■■□□□ 1.81
Sqstm1-201ENSMUST00000015981 Brd4Q9ESU6 1400 aaKnown RBP26.35■■□□□ 1.81
Sqstm1-201ENSMUST00000015981 UbtfP25976 765 aaKnown RBP26.3■■□□□ 1.8
Sqstm1-201ENSMUST00000015981 Ppargc1bQ8VHJ7 1014 aa26.19■■□□□ 1.78
Sqstm1-201ENSMUST00000015981 Gm38655A0A286YDK6 273 aa26.17■■□□□ 1.78
Sqstm1-201ENSMUST00000015981 TonslQ6NZL6 1363 aa26.08■■□□□ 1.76
Sqstm1-201ENSMUST00000015981 Cecr2E9Q2Z1 1453 aa26.03■■□□□ 1.76
Sqstm1-201ENSMUST00000015981 Synj1Q8CHC4 1574 aa26.02■■□□□ 1.76
Sqstm1-201ENSMUST00000015981 Sycp2Q9CUU3 1500 aa25.98■■□□□ 1.75
Sqstm1-201ENSMUST00000015981 Top2bQ64511 1612 aa25.92■■□□□ 1.74
Sqstm1-201ENSMUST00000015981 Rapgef2Q8CHG7 1496 aa25.91■■□□□ 1.74
Sqstm1-201ENSMUST00000015981 DiexfQ8BTT6 772 aaKnown RBP25.87■■□□□ 1.73
Sqstm1-201ENSMUST00000015981 Esf1Q3V1V3 845 aaKnown RBP25.84■■□□□ 1.73
Sqstm1-201ENSMUST00000015981 Fam71e1A1L3C1 212 aa25.78■■□□□ 1.72
Sqstm1-201ENSMUST00000015981 CftrP26361 1476 aa25.76■■□□□ 1.71
Sqstm1-201ENSMUST00000015981 Tnnt3Q9QZ47 272 aa25.75■■□□□ 1.71
Sqstm1-201ENSMUST00000015981 Hnrnpul2Q00PI9 745 aaKnown RBP25.72■■□□□ 1.71
Sqstm1-201ENSMUST00000015981 Cep162Q6ZQ06 1403 aa25.69■■□□□ 1.7
Sqstm1-201ENSMUST00000015981 Bcl11aQ9QYE3 773 aa25.69■■□□□ 1.7
Sqstm1-201ENSMUST00000015981 SafbD3YXK2 937 aaKnown RBP25.67■■□□□ 1.7
Sqstm1-201ENSMUST00000015981 Cc2d2aQ8CFW7 1633 aa25.67■■□□□ 1.7
Sqstm1-201ENSMUST00000015981 Myt1lP97500 1187 aa25.65■■□□□ 1.7
Sqstm1-201ENSMUST00000015981 Ncapd3Q6ZQK0 1506 aa25.63■■□□□ 1.69
Sqstm1-201ENSMUST00000015981 Mapk8ip2Q9ERE9 830 aa25.62■■□□□ 1.69
Sqstm1-201ENSMUST00000015981 Top2aQ01320 1528 aaKnown RBP25.56■■□□□ 1.68
Sqstm1-201ENSMUST00000015981 Cttnbp2B9EJA2 1648 aa25.53■■□□□ 1.68
Sqstm1-201ENSMUST00000015981 Plekhg3Q4VAC9 1341 aa25.51■■□□□ 1.68
Sqstm1-201ENSMUST00000015981 Clip1Q922J3 1391 aa25.5■■□□□ 1.67
Sqstm1-201ENSMUST00000015981 Fmn1Q05860 1466 aa25.5■■□□□ 1.67
Sqstm1-201ENSMUST00000015981 Ap3b1Q9Z1T1 1105 aa25.44■■□□□ 1.66
Sqstm1-201ENSMUST00000015981 Anp32aO35381 247 aa25.36■■□□□ 1.65
Sqstm1-201ENSMUST00000015981 Npm2Q80W85 207 aa25.35■■□□□ 1.65
Sqstm1-201ENSMUST00000015981 Eid3Q3V124 375 aa25.32■■□□□ 1.64
Sqstm1-201ENSMUST00000015981 Eif4g1Q6NZJ6 1600 aaKnown RBP25.31■■□□□ 1.64
Sqstm1-201ENSMUST00000015981 BicraF8VPZ9 1578 aa25.3■■□□□ 1.64
Sqstm1-201ENSMUST00000015981 Kdm5bQ80Y84 1544 aa25.29■■□□□ 1.64
Sqstm1-201ENSMUST00000015981 Znf710Q3U288 666 aa25.29■■□□□ 1.64
Sqstm1-201ENSMUST00000015981 Stra8P70278 393 aa25.24■■□□□ 1.63
Sqstm1-201ENSMUST00000015981 Rpap1Q80TE0 1409 aa25.21■■□□□ 1.63
Sqstm1-201ENSMUST00000015981 Rtl5Q5DTT4 599 aa25.16■■□□□ 1.62
Sqstm1-201ENSMUST00000015981 Smarca4Q3TKT4 1613 aaKnown RBP25.07■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Arap1Q4LDD4 1452 aa25.06■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Nolc1E9Q5C9 702 aaKnown RBP25.05■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Ifnlr1Q8CGK5 535 aa25.05■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Eea1Q8BL66 1411 aa25.04■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Calr4Q3TQS0 420 aa25.03■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Baz1bQ9Z277 1479 aa25.03■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Ccdc18Q640L5 1455 aa25.02■■□□□ 1.6
Sqstm1-201ENSMUST00000015981 Arhgap35Q91YM2 1499 aa24.99■■□□□ 1.59
Sqstm1-201ENSMUST00000015981 TchhA0A0B4J1F9 1599 aa24.99■■□□□ 1.59
Sqstm1-201ENSMUST00000015981 Arhgef5E9Q7D5 1581 aa24.97■■□□□ 1.59
Sqstm1-201ENSMUST00000015981 NclP09405 707 aaKnown RBP24.97■■□□□ 1.59
Sqstm1-201ENSMUST00000015981 Pelp1Q9DBD5 1123 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms