RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Igkv4-57-1A0A075B5M4 119 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Edn2P22389 175 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Spink13Q3UTS8 97 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Samd10Q7TST3 202 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Prr9Q8BV84 116 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gkn1Q9CR36 201 aa13.77□□□□□ -0.21
Trim47-202ENSMUST00000106441 Trav8-1A0A075B641 109 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Tcte2E9PY37 120 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Cks1bP61025 79 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Q4KKZ1 196 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Mrpl36Q99N90 102 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Cryba4Q9JJV0 196 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Insl3O09107 122 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 Tex26Q0VB26 296 aa13.76□□□□□ -0.21
Trim47-202ENSMUST00000106441 BsnO88737 3942 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 A730046J19RikA0A1B0GSN8 89 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Nf1Q04690 2841 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Hist1h1tQ07133 208 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Olfr312Q7TRZ9 308 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Srsf12Q8C8K3 266 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Znf580Q9DB38 172 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Tnfrsf23Q9ER63 176 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 P01802 115 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Defb26Q30KN7 186 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Defb45Q3V490 66 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 Ang5Q5GAN1 145 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 8030423J24RikQ9CX45 142 aa13.75□□□□□ -0.21
Trim47-202ENSMUST00000106441 MtorQ9JLN9 2549 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Ighv3-3A0A0A6YWL2 116 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Runx1Q03347 451 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gm10295Q8CCF3 114 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Mustn1Q99JI1 82 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Usp9yF8VPU6 2556 aa13.74□□□□□ -0.21
Trim47-202ENSMUST00000106441 Rpl36-ps4A0A140T8U4 117 aa13.73□□□□□ -0.21
Trim47-202ENSMUST00000106441 P01727 129 aa13.73□□□□□ -0.21
Trim47-202ENSMUST00000106441 P01837 106 aa13.73□□□□□ -0.21
Trim47-202ENSMUST00000106441 Ins2P01326 110 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 P01739 132 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 P01820 115 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gpr82Q8BZR0 328 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gm16223Q8CBM3 117 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 Tenm4Q3UHK6 2771 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 Fxyd7P59648 80 aa13.72□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gm12845A0A0N4SUM5 588 aa13.71□□□□□ -0.21
Trim47-202ENSMUST00000106441 Gm45785A0A1B0GT05 94 aa13.71□□□□□ -0.21
Trim47-202ENSMUST00000106441 SvipQ3UZP4 77 aa13.71□□□□□ -0.21
Trim47-202ENSMUST00000106441 P18527 97 aa13.71□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ang3P97802 145 aa13.71□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm28269A0A087WSG3 125 aa13.7□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ighv8-5A0A0A6YY60 119 aa13.7□□□□□ -0.22
Trim47-202ENSMUST00000106441 Cks1brtQ3UNC9 96 aa13.7□□□□□ -0.22
Trim47-202ENSMUST00000106441 Pgpep1Q9ESW8 209 aa13.7□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm10271F6WY25 52 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 P01812 117 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Defa3P28310 93 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Defa10P50708 93 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Defa15P50713 93 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 BlcapP62951 87 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 BC067074F6RXI4 2391 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Fam240aJ3QNP9 97 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm5629P06327 117 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ube2d1P61080 147 aaKnown RBP13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Rpl32P62911 135 aaKnown RBP13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 Plac1Q9JI83 173 aa13.69□□□□□ -0.22
Trim47-202ENSMUST00000106441 CubnQ9JLB4 3623 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Brd3osA0A1B0GRB6 84 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Iah1Q9DB29 249 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Cdip1Q9DB75 208 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm45753A0A1C7CYU8 86 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 P01750 117 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Olfr313Q5NC55 308 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Klk7Q91VE3 249 aa13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Rpl11Q9CXW4 178 aaKnown RBP13.68□□□□□ -0.22
Trim47-202ENSMUST00000106441 Mrps12O35680 139 aa13.67□□□□□ -0.22
Trim47-202ENSMUST00000106441 Csn3P06796 181 aa13.67□□□□□ -0.22
Trim47-202ENSMUST00000106441 NrepQ07475 68 aa13.67□□□□□ -0.22
Trim47-202ENSMUST00000106441 Trav7-2Q5R1I3 112 aa13.67□□□□□ -0.22
Trim47-202ENSMUST00000106441 Igkv4-69A0A0B4J1I6 116 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm44965A0A0N4SVR3 59 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm6040Q4QY32 63 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Pradc1Q9D9N8 188 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Tcrg-C3L7N479 172 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 P03985 172 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ube2d3P61079 147 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ube2d2P62838 147 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Tmem170bP86050 132 aa13.66□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ighv1-66A0A075B5X5 117 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Ighv1-64A0A075B5X3 117 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm3250E9Q1M3 230 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Gm26661M0QWV4 156 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Sprr3O09116 238 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 MdfiP70331 251 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Usmg5Q78IK2 58 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Krtap26-1Q9D7N2 215 aa13.65□□□□□ -0.22
Trim47-202ENSMUST00000106441 Trav4n-4A0A075B615 110 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Trav6-4A0A075B6B4 115 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 SbsponQ3UPR9 264 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Gemin7Q9CWY4 129 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Ccl24Q9JKC0 119 aa13.64□□□□□ -0.23
Trim47-202ENSMUST00000106441 Dpm2Q9Z324 84 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms