Protein–RNA interactions for Protein: Q9ER63

Tnfrsf23, Tumor necrosis factor receptor superfamily member 23, mousemouse

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf23Q9ER63 Gm25239-201ENSMUST00000174915 86 ntBASIC27.91■■■□□ 2.06
Tnfrsf23Q9ER63 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Tnfrsf23Q9ER63 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Tnfrsf23Q9ER63 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Tnfrsf23Q9ER63 Gm15042-201ENSMUST00000120212 883 ntBASIC24.51■■□□□ 1.51
Tnfrsf23Q9ER63 Gm24109-201ENSMUST00000175489 103 ntBASIC24.13■■□□□ 1.45
Tnfrsf23Q9ER63 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tnfrsf23Q9ER63 Gm15045-201ENSMUST00000117359 883 ntBASIC23.99■■□□□ 1.43
Tnfrsf23Q9ER63 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Tnfrsf23Q9ER63 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Tnfrsf23Q9ER63 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tnfrsf23Q9ER63 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Tnfrsf23Q9ER63 Gm23366-201ENSMUST00000175022 89 ntBASIC23.32■■□□□ 1.32
Tnfrsf23Q9ER63 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tnfrsf23Q9ER63 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tnfrsf23Q9ER63 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tnfrsf23Q9ER63 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.94■■□□□ 1.26
Tnfrsf23Q9ER63 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Tnfrsf23Q9ER63 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tnfrsf23Q9ER63 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tnfrsf23Q9ER63 Psd-208ENSMUST00000224556 2034 ntBASIC22.67■■□□□ 1.22
Tnfrsf23Q9ER63 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tnfrsf23Q9ER63 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tnfrsf23Q9ER63 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Tnfrsf23Q9ER63 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tnfrsf23Q9ER63 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tnfrsf23Q9ER63 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tnfrsf23Q9ER63 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnfrsf23Q9ER63 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.48■■□□□ 1.19
Tnfrsf23Q9ER63 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.42■■□□□ 1.18
Tnfrsf23Q9ER63 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.34■■□□□ 1.17
Tnfrsf23Q9ER63 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnfrsf23Q9ER63 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Tnfrsf23Q9ER63 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tnfrsf23Q9ER63 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tnfrsf23Q9ER63 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Tnfrsf23Q9ER63 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.06■■□□□ 1.12
Tnfrsf23Q9ER63 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Tnfrsf23Q9ER63 Gm25238-201ENSMUST00000174914 89 ntBASIC21.99■■□□□ 1.11
Tnfrsf23Q9ER63 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tnfrsf23Q9ER63 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.95■■□□□ 1.1
Tnfrsf23Q9ER63 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tnfrsf23Q9ER63 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnfrsf23Q9ER63 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnfrsf23Q9ER63 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.65■■□□□ 1.06
Tnfrsf23Q9ER63 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf23Q9ER63 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf23Q9ER63 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf23Q9ER63 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Tnfrsf23Q9ER63 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf23Q9ER63 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.53■■□□□ 1.04
Tnfrsf23Q9ER63 Gm27325-201ENSMUST00000175467 74 ntBASIC21.5■■□□□ 1.03
Tnfrsf23Q9ER63 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf23Q9ER63 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnfrsf23Q9ER63 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf23Q9ER63 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf23Q9ER63 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.32■■□□□ 1
Tnfrsf23Q9ER63 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf23Q9ER63 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.27■■□□□ 1
Tnfrsf23Q9ER63 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.25■□□□□ 0.99
Tnfrsf23Q9ER63 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Tnfrsf23Q9ER63 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf23Q9ER63 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf23Q9ER63 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Tnfrsf23Q9ER63 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.15■□□□□ 0.98
Tnfrsf23Q9ER63 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf23Q9ER63 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Tnfrsf23Q9ER63 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfrsf23Q9ER63 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf23Q9ER63 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf23Q9ER63 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf23Q9ER63 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf23Q9ER63 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf23Q9ER63 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfrsf23Q9ER63 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Tnfrsf23Q9ER63 Rab21-202ENSMUST00000218831 843 ntBASIC21.03■□□□□ 0.96
Tnfrsf23Q9ER63 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf23Q9ER63 Gm25262-201ENSMUST00000174934 133 ntBASIC20.99■□□□□ 0.95
Tnfrsf23Q9ER63 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf23Q9ER63 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf23Q9ER63 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf23Q9ER63 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.94■□□□□ 0.94
Tnfrsf23Q9ER63 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.93■□□□□ 0.94
Tnfrsf23Q9ER63 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfrsf23Q9ER63 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.89■□□□□ 0.93
Tnfrsf23Q9ER63 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf23Q9ER63 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.85■□□□□ 0.93
Tnfrsf23Q9ER63 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf23Q9ER63 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tnfrsf23Q9ER63 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Tnfrsf23Q9ER63 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.75■□□□□ 0.91
Tnfrsf23Q9ER63 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf23Q9ER63 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf23Q9ER63 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfrsf23Q9ER63 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf23Q9ER63 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf23Q9ER63 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf23Q9ER63 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf23Q9ER63 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.63■□□□□ 0.89
Tnfrsf23Q9ER63 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms