Protein–RNA interactions for Protein: A0A140T8U4

Rpl36-ps4, Ribosomal protein L36, pseudogene 4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl36-ps4A0A140T8U4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,78■■□□□ 1,56
Rpl36-ps4A0A140T8U4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,95■■□□□ 1,42
Rpl36-ps4A0A140T8U4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,85■■□□□ 1,41
Rpl36-ps4A0A140T8U4 Gm25239-201ENSMUST00000174915 86 ntBASIC23,45■■□□□ 1,34
Rpl36-ps4A0A140T8U4 Psd-208ENSMUST00000224556 2034 ntBASIC23,28■■□□□ 1,32
Rpl36-ps4A0A140T8U4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Rpl36-ps4A0A140T8U4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,69■■□□□ 1,22
Rpl36-ps4A0A140T8U4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,63■■□□□ 1,21
Rpl36-ps4A0A140T8U4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,5■■□□□ 1,19
Rpl36-ps4A0A140T8U4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Rpl36-ps4A0A140T8U4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,23■■□□□ 1,15
Rpl36-ps4A0A140T8U4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,14
Rpl36-ps4A0A140T8U4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,17■■□□□ 1,14
Rpl36-ps4A0A140T8U4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21,9■■□□□ 1,1
Rpl36-ps4A0A140T8U4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Rpl36-ps4A0A140T8U4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Rpl36-ps4A0A140T8U4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,75■■□□□ 1,07
Rpl36-ps4A0A140T8U4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,75■■□□□ 1,07
Rpl36-ps4A0A140T8U4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,65■■□□□ 1,06
Rpl36-ps4A0A140T8U4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,61■■□□□ 1,05
Rpl36-ps4A0A140T8U4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,56■■□□□ 1,04
Rpl36-ps4A0A140T8U4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,55■■□□□ 1,04
Rpl36-ps4A0A140T8U4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,54■■□□□ 1,04
Rpl36-ps4A0A140T8U4 Gm15042-201ENSMUST00000120212 883 ntBASIC21,43■■□□□ 1,02
Rpl36-ps4A0A140T8U4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,4■■□□□ 1,02
Rpl36-ps4A0A140T8U4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,39■■□□□ 1,01
Rpl36-ps4A0A140T8U4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Rpl36-ps4A0A140T8U4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Rpl36-ps4A0A140T8U4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,22■□□□□ 0,99
Rpl36-ps4A0A140T8U4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Rpl36-ps4A0A140T8U4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,07■□□□□ 0,96
Rpl36-ps4A0A140T8U4 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,05■□□□□ 0,96
Rpl36-ps4A0A140T8U4 Gm15045-201ENSMUST00000117359 883 ntBASIC21,03■□□□□ 0,96
Rpl36-ps4A0A140T8U4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,02■□□□□ 0,96
Rpl36-ps4A0A140T8U4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0,95
Rpl36-ps4A0A140T8U4 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,97■□□□□ 0,95
Rpl36-ps4A0A140T8U4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20,93■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,91■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20,9■□□□□ 0,94
Rpl36-ps4A0A140T8U4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20,88■□□□□ 0,93
Rpl36-ps4A0A140T8U4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20,87■□□□□ 0,93
Rpl36-ps4A0A140T8U4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20,86■□□□□ 0,93
Rpl36-ps4A0A140T8U4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20,85■□□□□ 0,93
Rpl36-ps4A0A140T8U4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
Rpl36-ps4A0A140T8U4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,77■□□□□ 0,92
Rpl36-ps4A0A140T8U4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20,73■□□□□ 0,91
Rpl36-ps4A0A140T8U4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,73■□□□□ 0,91
Rpl36-ps4A0A140T8U4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,67■□□□□ 0,9
Rpl36-ps4A0A140T8U4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,65■□□□□ 0,9
Rpl36-ps4A0A140T8U4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,89
Rpl36-ps4A0A140T8U4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,61■□□□□ 0,89
Rpl36-ps4A0A140T8U4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Rpl36-ps4A0A140T8U4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,51■□□□□ 0,87
Rpl36-ps4A0A140T8U4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Rpl36-ps4A0A140T8U4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Rpl36-ps4A0A140T8U4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20,44■□□□□ 0,86
Rpl36-ps4A0A140T8U4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,38■□□□□ 0,85
Rpl36-ps4A0A140T8U4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,36■□□□□ 0,85
Rpl36-ps4A0A140T8U4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,31■□□□□ 0,84
Rpl36-ps4A0A140T8U4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,3■□□□□ 0,84
Rpl36-ps4A0A140T8U4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,3■□□□□ 0,84
Rpl36-ps4A0A140T8U4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,28■□□□□ 0,84
Rpl36-ps4A0A140T8U4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,27■□□□□ 0,84
Rpl36-ps4A0A140T8U4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,27■□□□□ 0,84
Rpl36-ps4A0A140T8U4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,23■□□□□ 0,83
Rpl36-ps4A0A140T8U4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,21■□□□□ 0,83
Rpl36-ps4A0A140T8U4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,17■□□□□ 0,82
Rpl36-ps4A0A140T8U4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20,15■□□□□ 0,82
Rpl36-ps4A0A140T8U4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Rpl36-ps4A0A140T8U4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,05■□□□□ 0,8
Rpl36-ps4A0A140T8U4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,03■□□□□ 0,8
Rpl36-ps4A0A140T8U4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,02■□□□□ 0,8
Rpl36-ps4A0A140T8U4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0,79
Rpl36-ps4A0A140T8U4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Rpl36-ps4A0A140T8U4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19,99■□□□□ 0,79
Rpl36-ps4A0A140T8U4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19,96■□□□□ 0,79
Rpl36-ps4A0A140T8U4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19,94■□□□□ 0,78
Rpl36-ps4A0A140T8U4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19,92■□□□□ 0,78
Rpl36-ps4A0A140T8U4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19,92■□□□□ 0,78
Rpl36-ps4A0A140T8U4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19,89■□□□□ 0,78
Rpl36-ps4A0A140T8U4 Gm24109-201ENSMUST00000175489 103 ntBASIC19,88■□□□□ 0,77
Rpl36-ps4A0A140T8U4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19,88■□□□□ 0,77
Rpl36-ps4A0A140T8U4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19,87■□□□□ 0,77
Rpl36-ps4A0A140T8U4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,77
Rpl36-ps4A0A140T8U4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19,83■□□□□ 0,76
Rpl36-ps4A0A140T8U4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19,82■□□□□ 0,76
Rpl36-ps4A0A140T8U4 Gm23366-201ENSMUST00000175022 89 ntBASIC19,8■□□□□ 0,76
Rpl36-ps4A0A140T8U4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19,78■□□□□ 0,76
Rpl36-ps4A0A140T8U4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
Rpl36-ps4A0A140T8U4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19,74■□□□□ 0,75
Rpl36-ps4A0A140T8U4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,74■□□□□ 0,75
Rpl36-ps4A0A140T8U4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19,71■□□□□ 0,75
Rpl36-ps4A0A140T8U4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19,7■□□□□ 0,74
Rpl36-ps4A0A140T8U4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19,7■□□□□ 0,74
Rpl36-ps4A0A140T8U4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19,69■□□□□ 0,74
Rpl36-ps4A0A140T8U4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,69■□□□□ 0,74
Rpl36-ps4A0A140T8U4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19,68■□□□□ 0,74
Retrieved 100 of 76,532 protein–RNA pairs in 10,2 ms