Protein–RNA interactions for Protein: A0A075B5M4

Igkv4-57-1, Immunoglobulin kappa variable 4-57-1 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-57-1A0A075B5M4 Gm25239-201ENSMUST00000174915 86 ntBASIC27.58■■■□□ 2.01
Igkv4-57-1A0A075B5M4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Igkv4-57-1A0A075B5M4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Igkv4-57-1A0A075B5M4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv4-57-1A0A075B5M4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Igkv4-57-1A0A075B5M4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Igkv4-57-1A0A075B5M4 Gm15042-201ENSMUST00000120212 883 ntBASIC24.53■■□□□ 1.52
Igkv4-57-1A0A075B5M4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Igkv4-57-1A0A075B5M4 Psd-208ENSMUST00000224556 2034 ntBASIC24.13■■□□□ 1.45
Igkv4-57-1A0A075B5M4 Gm15045-201ENSMUST00000117359 883 ntBASIC24.05■■□□□ 1.44
Igkv4-57-1A0A075B5M4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Igkv4-57-1A0A075B5M4 Gm24109-201ENSMUST00000175489 103 ntBASIC23.7■■□□□ 1.38
Igkv4-57-1A0A075B5M4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.65■■□□□ 1.38
Igkv4-57-1A0A075B5M4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Igkv4-57-1A0A075B5M4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Igkv4-57-1A0A075B5M4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Igkv4-57-1A0A075B5M4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Igkv4-57-1A0A075B5M4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Igkv4-57-1A0A075B5M4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Igkv4-57-1A0A075B5M4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv4-57-1A0A075B5M4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Igkv4-57-1A0A075B5M4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Igkv4-57-1A0A075B5M4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Igkv4-57-1A0A075B5M4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Igkv4-57-1A0A075B5M4 Gm23366-201ENSMUST00000175022 89 ntBASIC23.11■■□□□ 1.29
Igkv4-57-1A0A075B5M4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Igkv4-57-1A0A075B5M4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv4-57-1A0A075B5M4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.02■■□□□ 1.28
Igkv4-57-1A0A075B5M4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Igkv4-57-1A0A075B5M4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv4-57-1A0A075B5M4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Igkv4-57-1A0A075B5M4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Igkv4-57-1A0A075B5M4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.79■■□□□ 1.24
Igkv4-57-1A0A075B5M4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Igkv4-57-1A0A075B5M4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Igkv4-57-1A0A075B5M4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Igkv4-57-1A0A075B5M4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Igkv4-57-1A0A075B5M4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.53■■□□□ 1.2
Igkv4-57-1A0A075B5M4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv4-57-1A0A075B5M4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv4-57-1A0A075B5M4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv4-57-1A0A075B5M4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.38■■□□□ 1.17
Igkv4-57-1A0A075B5M4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv4-57-1A0A075B5M4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.22■■□□□ 1.15
Igkv4-57-1A0A075B5M4 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.18■■□□□ 1.14
Igkv4-57-1A0A075B5M4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv4-57-1A0A075B5M4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Igkv4-57-1A0A075B5M4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Igkv4-57-1A0A075B5M4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22■■□□□ 1.11
Igkv4-57-1A0A075B5M4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv4-57-1A0A075B5M4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Igkv4-57-1A0A075B5M4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.9■■□□□ 1.1
Igkv4-57-1A0A075B5M4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv4-57-1A0A075B5M4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv4-57-1A0A075B5M4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv4-57-1A0A075B5M4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv4-57-1A0A075B5M4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv4-57-1A0A075B5M4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.72■■□□□ 1.07
Igkv4-57-1A0A075B5M4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv4-57-1A0A075B5M4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv4-57-1A0A075B5M4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv4-57-1A0A075B5M4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Gm25238-201ENSMUST00000174914 89 ntBASIC21.62■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.61■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.58■■□□□ 1.05
Igkv4-57-1A0A075B5M4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.58■■□□□ 1.04
Igkv4-57-1A0A075B5M4 Gm27325-201ENSMUST00000175467 74 ntBASIC21.57■■□□□ 1.04
Igkv4-57-1A0A075B5M4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.54■■□□□ 1.04
Igkv4-57-1A0A075B5M4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv4-57-1A0A075B5M4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv4-57-1A0A075B5M4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv4-57-1A0A075B5M4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv4-57-1A0A075B5M4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.4■■□□□ 1.02
Igkv4-57-1A0A075B5M4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igkv4-57-1A0A075B5M4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Igkv4-57-1A0A075B5M4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Igkv4-57-1A0A075B5M4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Igkv4-57-1A0A075B5M4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igkv4-57-1A0A075B5M4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Igkv4-57-1A0A075B5M4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Igkv4-57-1A0A075B5M4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Igkv4-57-1A0A075B5M4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igkv4-57-1A0A075B5M4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv4-57-1A0A075B5M4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv4-57-1A0A075B5M4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.12■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.11■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-57-1A0A075B5M4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv4-57-1A0A075B5M4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.05■□□□□ 0.96
Igkv4-57-1A0A075B5M4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv4-57-1A0A075B5M4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv4-57-1A0A075B5M4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Igkv4-57-1A0A075B5M4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv4-57-1A0A075B5M4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms