Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm25239-201ENSMUST00000174915 86 ntBASIC26.41■■□□□ 1.82
Trav7-2Q5R1I3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trav7-2Q5R1I3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Trav7-2Q5R1I3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Trav7-2Q5R1I3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trav7-2Q5R1I3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Trav7-2Q5R1I3 Gm15042-201ENSMUST00000120212 883 ntBASIC23.46■■□□□ 1.35
Trav7-2Q5R1I3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav7-2Q5R1I3 Gm15045-201ENSMUST00000117359 883 ntBASIC22.95■■□□□ 1.26
Trav7-2Q5R1I3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trav7-2Q5R1I3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Trav7-2Q5R1I3 Gm24109-201ENSMUST00000175489 103 ntBASIC22.69■■□□□ 1.22
Trav7-2Q5R1I3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trav7-2Q5R1I3 Psd-208ENSMUST00000224556 2034 ntBASIC22.57■■□□□ 1.2
Trav7-2Q5R1I3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.38■■□□□ 1.17
Trav7-2Q5R1I3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav7-2Q5R1I3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav7-2Q5R1I3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav7-2Q5R1I3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trav7-2Q5R1I3 Gm23366-201ENSMUST00000175022 89 ntBASIC22.17■■□□□ 1.14
Trav7-2Q5R1I3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav7-2Q5R1I3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trav7-2Q5R1I3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav7-2Q5R1I3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trav7-2Q5R1I3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav7-2Q5R1I3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trav7-2Q5R1I3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav7-2Q5R1I3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav7-2Q5R1I3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.84■■□□□ 1.09
Trav7-2Q5R1I3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trav7-2Q5R1I3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav7-2Q5R1I3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trav7-2Q5R1I3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav7-2Q5R1I3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.6■■□□□ 1.05
Trav7-2Q5R1I3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav7-2Q5R1I3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.51■■□□□ 1.03
Trav7-2Q5R1I3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trav7-2Q5R1I3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav7-2Q5R1I3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trav7-2Q5R1I3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav7-2Q5R1I3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav7-2Q5R1I3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.27■■□□□ 1
Trav7-2Q5R1I3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav7-2Q5R1I3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav7-2Q5R1I3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav7-2Q5R1I3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav7-2Q5R1I3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.94■□□□□ 0.94
Trav7-2Q5R1I3 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.94■□□□□ 0.94
Trav7-2Q5R1I3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav7-2Q5R1I3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Trav7-2Q5R1I3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav7-2Q5R1I3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7-2Q5R1I3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav7-2Q5R1I3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav7-2Q5R1I3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav7-2Q5R1I3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav7-2Q5R1I3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trav7-2Q5R1I3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav7-2Q5R1I3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav7-2Q5R1I3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav7-2Q5R1I3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav7-2Q5R1I3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.76■□□□□ 0.91
Trav7-2Q5R1I3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav7-2Q5R1I3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav7-2Q5R1I3 Gm25238-201ENSMUST00000174914 89 ntBASIC20.7■□□□□ 0.9
Trav7-2Q5R1I3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav7-2Q5R1I3 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.65■□□□□ 0.9
Trav7-2Q5R1I3 Gm27325-201ENSMUST00000175467 74 ntBASIC20.62■□□□□ 0.89
Trav7-2Q5R1I3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav7-2Q5R1I3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav7-2Q5R1I3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav7-2Q5R1I3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.56■□□□□ 0.88
Trav7-2Q5R1I3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Trav7-2Q5R1I3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav7-2Q5R1I3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav7-2Q5R1I3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.52■□□□□ 0.88
Trav7-2Q5R1I3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.51■□□□□ 0.87
Trav7-2Q5R1I3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7-2Q5R1I3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav7-2Q5R1I3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trav7-2Q5R1I3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav7-2Q5R1I3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Trav7-2Q5R1I3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav7-2Q5R1I3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav7-2Q5R1I3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav7-2Q5R1I3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav7-2Q5R1I3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7-2Q5R1I3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav7-2Q5R1I3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.25■□□□□ 0.83
Trav7-2Q5R1I3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.24■□□□□ 0.83
Trav7-2Q5R1I3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trav7-2Q5R1I3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav7-2Q5R1I3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav7-2Q5R1I3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav7-2Q5R1I3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav7-2Q5R1I3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav7-2Q5R1I3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav7-2Q5R1I3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trav7-2Q5R1I3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trav7-2Q5R1I3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 7.6 ms