RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Odf3l1Q810P2 275 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Igll1P20764 209 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Trav3-3Q5R1C3 114 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Cphx2Q8BX39 182 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Leap2Q91V13 76 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Omt2bD3YX29 119 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Gm9242J3QNY1 357 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Ormdl2Q9CQZ0 153 aa10.22□□□□□ -0.77
Clcn3-204ENSMUST00000110301 Scgb1b19F6WYW0 93 aa10.21□□□□□ -0.77
Clcn3-204ENSMUST00000110301 AtrQ9JKK8 2635 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Smim13E9Q942 88 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm28038F7BCN9 126 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm5150Q1AN92 299 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Dchs2A0A0A6YW72 3346 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trav8-1A0A075B641 109 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm20379A0A087WR34 119 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm815Q3UWS2 115 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Rasl10aQ8K5A4 203 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Anapc13Q8R034 74 aa10.21□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trdv2-1A0A0G2JGB9 116 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Klf12O35738 402 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Rnase1P00683 149 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Sumo2P61957 95 aaKnown RBP10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Cysltr1Q99JA4 352 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Lgals6O54891 301 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Tm4sf20Q9CQY8 226 aa10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Srsf9Q9D0B0 222 aaKnown RBP10.2□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trbv14A0A140T8L9 115 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 1810032O08RikE9PZV8 113 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Mrps12O35680 139 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Ube2cQ9D1C1 179 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Tcte2E9PY37 120 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Isg15Q64339 161 aaKnown RBP10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gtsf1lQ9CWD0 151 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 OtorQ9JIE3 128 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Xlr5cQ9JJR2 179 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 EsdQ9R0P3 282 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Ighv1-23A0A0A6YVW3 117 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Fam240bJ3QMB3 78 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm10226O88253 85 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 PlnP61014 52 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Vwc2lQ505H4 222 aa10.19□□□□□ -0.78
Clcn3-204ENSMUST00000110301 TtrP07309 147 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 SNORCQ9CXL7 121 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Nat8b-psE0CYC6 232 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 8030423J24RikQ9CX45 142 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trav14n-2A0A0G2JDF5 121 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Cd69P37217 199 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 GalmQ8K157 342 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Erg28Q9ERY9 140 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Ucn2Q99ML8 113 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 4930544G11RikQ9CR99 193 aa10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Ssbp1Q9CYR0 152 aaKnown RBP10.18□□□□□ -0.78
Clcn3-204ENSMUST00000110301 P01738 130 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Tcl1b4P56844 120 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Sdhaf1Q3U276 118 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 BC106179Q8C9L1 186 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Olfr975Q8VG91 310 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Usp9yF8VPU6 2556 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gpx7Q99LJ6 186 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Igkv4-71A0A0G2JEH0 117 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 P01753 117 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Htr1dQ61224 374 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Try10Q792Z1 246 aaKnown RBP10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Higd1aQ9JLR9 95 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Obox8V9GWY9 217 aa10.17□□□□□ -0.78
Clcn3-204ENSMUST00000110301 CicQ924A2 2510 aa10.16□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trbv13-1A0A0B4J1P8 112 aa10.16□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Adgrg4B7ZCC9 3073 aa10.16□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Card19Q9D1I2 183 aa10.16□□□□□ -0.78
Clcn3-204ENSMUST00000110301 HilpdaQ9JLS0 64 aa10.16□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Trav9n-2A0A0G2JDP3 113 aa10.15□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Znf239P24399 201 aa10.15□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Gm5468Q8C3D3 155 aa10.15□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Ighv1-53A0A075B5W3 117 aa10.15□□□□□ -0.78
Clcn3-204ENSMUST00000110301 Defa3P28310 93 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Defa10P50708 93 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Defa15P50713 93 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Ovol2Q8CIV7 274 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Prss29Q99MS4 279 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Ndufb4Q9CQC7 129 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Tmem263Q9DAM7 115 aa10.15□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Ighv1-49A0A0A6YWX2 117 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Trav3n-3A0A0G2JEM0 114 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Gm6812B1AXU1 112 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Gm20604F8WIA3 75 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Edn1P22387 202 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Cfc1P97766 202 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 P01756 117 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 P01757 117 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 MturnQ8CGA4 131 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Shisa9Q9CZN4 424 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Ss18l2Q9D174 77 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Lamtor2Q9JHS3 125 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Defa37K9J724 93 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Defa5P28312 93 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Cox7a2lQ61387 111 aa10.14□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Ighv1-82A0A0G2JEU7 117 aa10.13□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Esp24A8R0V6 68 aa10.13□□□□□ -0.79
Clcn3-204ENSMUST00000110301 Rpl36aP83882 106 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 106 ms