Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Gm25239-201ENSMUST00000174915 86 ntBASIC25,73■■□□□ 1,71
Ighv1-23A0A0A6YVW3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,7■■□□□ 1,7
Ighv1-23A0A0A6YVW3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,83■■□□□ 1,57
Ighv1-23A0A0A6YVW3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,81■■□□□ 1,56
Ighv1-23A0A0A6YVW3 Psd-208ENSMUST00000224556 2034 ntBASIC24,08■■□□□ 1,45
Ighv1-23A0A0A6YVW3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,64■■□□□ 1,38
Ighv1-23A0A0A6YVW3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,59■■□□□ 1,37
Ighv1-23A0A0A6YVW3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,59■■□□□ 1,37
Ighv1-23A0A0A6YVW3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ighv1-23A0A0A6YVW3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,38■■□□□ 1,33
Ighv1-23A0A0A6YVW3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Ighv1-23A0A0A6YVW3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Ighv1-23A0A0A6YVW3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Ighv1-23A0A0A6YVW3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Ighv1-23A0A0A6YVW3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,99■■□□□ 1,27
Ighv1-23A0A0A6YVW3 Gm15042-201ENSMUST00000120212 883 ntBASIC22,91■■□□□ 1,26
Ighv1-23A0A0A6YVW3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,82■■□□□ 1,24
Ighv1-23A0A0A6YVW3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,65■■□□□ 1,22
Ighv1-23A0A0A6YVW3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,57■■□□□ 1,2
Ighv1-23A0A0A6YVW3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,56■■□□□ 1,2
Ighv1-23A0A0A6YVW3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Ighv1-23A0A0A6YVW3 Gm15045-201ENSMUST00000117359 883 ntBASIC22,43■■□□□ 1,18
Ighv1-23A0A0A6YVW3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,41■■□□□ 1,18
Ighv1-23A0A0A6YVW3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Ighv1-23A0A0A6YVW3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Ighv1-23A0A0A6YVW3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,19■■□□□ 1,14
Ighv1-23A0A0A6YVW3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,12■■□□□ 1,13
Ighv1-23A0A0A6YVW3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22,11■■□□□ 1,13
Ighv1-23A0A0A6YVW3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Ighv1-23A0A0A6YVW3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,11■■□□□ 1,13
Ighv1-23A0A0A6YVW3 Gm24109-201ENSMUST00000175489 103 ntBASIC22,07■■□□□ 1,12
Ighv1-23A0A0A6YVW3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,06■■□□□ 1,12
Ighv1-23A0A0A6YVW3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Ighv1-23A0A0A6YVW3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,03■■□□□ 1,12
Ighv1-23A0A0A6YVW3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,02■■□□□ 1,12
Ighv1-23A0A0A6YVW3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22■■□□□ 1,11
Ighv1-23A0A0A6YVW3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,88■■□□□ 1,09
Ighv1-23A0A0A6YVW3 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,84■■□□□ 1,09
Ighv1-23A0A0A6YVW3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Ighv1-23A0A0A6YVW3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,08
Ighv1-23A0A0A6YVW3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Ighv1-23A0A0A6YVW3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,72■■□□□ 1,07
Ighv1-23A0A0A6YVW3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,69■■□□□ 1,06
Ighv1-23A0A0A6YVW3 Gm23366-201ENSMUST00000175022 89 ntBASIC21,59■■□□□ 1,05
Ighv1-23A0A0A6YVW3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,58■■□□□ 1,05
Ighv1-23A0A0A6YVW3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,55■■□□□ 1,04
Ighv1-23A0A0A6YVW3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,54■■□□□ 1,04
Ighv1-23A0A0A6YVW3 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,52■■□□□ 1,04
Ighv1-23A0A0A6YVW3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Ighv1-23A0A0A6YVW3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Ighv1-23A0A0A6YVW3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,43■■□□□ 1,02
Ighv1-23A0A0A6YVW3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,41■■□□□ 1,02
Ighv1-23A0A0A6YVW3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,37■■□□□ 1,01
Ighv1-23A0A0A6YVW3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,36■■□□□ 1,01
Ighv1-23A0A0A6YVW3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Ighv1-23A0A0A6YVW3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,3■■□□□ 1
Ighv1-23A0A0A6YVW3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ighv1-23A0A0A6YVW3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ighv1-23A0A0A6YVW3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,28■■□□□ 1
Ighv1-23A0A0A6YVW3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,24■□□□□ 0,99
Ighv1-23A0A0A6YVW3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21,16■□□□□ 0,98
Ighv1-23A0A0A6YVW3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,16■□□□□ 0,98
Ighv1-23A0A0A6YVW3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Ighv1-23A0A0A6YVW3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,11■□□□□ 0,97
Ighv1-23A0A0A6YVW3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,08■□□□□ 0,96
Ighv1-23A0A0A6YVW3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,04■□□□□ 0,96
Ighv1-23A0A0A6YVW3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Ighv1-23A0A0A6YVW3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Ighv1-23A0A0A6YVW3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,01■□□□□ 0,95
Ighv1-23A0A0A6YVW3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,97■□□□□ 0,95
Ighv1-23A0A0A6YVW3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20,96■□□□□ 0,95
Ighv1-23A0A0A6YVW3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Ighv1-23A0A0A6YVW3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Ighv1-23A0A0A6YVW3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,88■□□□□ 0,93
Ighv1-23A0A0A6YVW3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv1-23A0A0A6YVW3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Ighv1-23A0A0A6YVW3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20,81■□□□□ 0,92
Ighv1-23A0A0A6YVW3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,79■□□□□ 0,92
Ighv1-23A0A0A6YVW3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,74■□□□□ 0,91
Ighv1-23A0A0A6YVW3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20,73■□□□□ 0,91
Ighv1-23A0A0A6YVW3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,71■□□□□ 0,91
Ighv1-23A0A0A6YVW3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20,68■□□□□ 0,9
Ighv1-23A0A0A6YVW3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,9
Ighv1-23A0A0A6YVW3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,59■□□□□ 0,89
Ighv1-23A0A0A6YVW3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,58■□□□□ 0,89
Ighv1-23A0A0A6YVW3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,56■□□□□ 0,88
Ighv1-23A0A0A6YVW3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Ighv1-23A0A0A6YVW3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Ighv1-23A0A0A6YVW3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Ighv1-23A0A0A6YVW3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,46■□□□□ 0,87
Ighv1-23A0A0A6YVW3 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20,45■□□□□ 0,86
Ighv1-23A0A0A6YVW3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,4■□□□□ 0,86
Ighv1-23A0A0A6YVW3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20,39■□□□□ 0,86
Ighv1-23A0A0A6YVW3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20,39■□□□□ 0,86
Ighv1-23A0A0A6YVW3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20,39■□□□□ 0,85
Ighv1-23A0A0A6YVW3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20,37■□□□□ 0,85
Ighv1-23A0A0A6YVW3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20,36■□□□□ 0,85
Ighv1-23A0A0A6YVW3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,35■□□□□ 0,85
Ighv1-23A0A0A6YVW3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20,34■□□□□ 0,85
Ighv1-23A0A0A6YVW3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,84
Retrieved 100 of 76,532 protein–RNA pairs in 16,7 ms