RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 A230072I06RikQ3UUJ8 172 aa12.87□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Srsf2Q62093 221 aaKnown RBP12.87□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Ankrd39Q9D2X0 183 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Ep300B2RWS6 2412 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Anapc13Q8R034 74 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Med12A2AGH6 2190 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Nckap5E9QAE1 1909 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 4930447F04RikA2AFR2 126 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Ccl17F6R5P4 103 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Hist2h2beQ64524 126 aa12.86□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Igkv3-9A0A140T8P4 119 aa12.85□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Hbb-b2P02089 147 aa12.85□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Gm17324Q8C6J8 137 aa12.85□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Tnrc6aQ3UHK8 1896 aaKnown RBP12.85□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Dmrtc2Q8CGW9 370 aa12.85□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Tcf20Q9EPQ8 1987 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Trav14n-2A0A0G2JDF5 121 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 E030018B13RikJ3QMS9 113 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Defa1P11477 93 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Lyrm9Q3UN90 78 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Spata25Q9DA57 226 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Igkv4-81A0A0G2JEY5 119 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Znf664Q4VA44 261 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Trav7-2Q5R1I3 112 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Tm4sf20Q9CQY8 226 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Rs1Q9Z1L4 224 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Gm29423A0A087WRM1 55 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Igkv8-34A0A0G2JDU0 121 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Gm20499D3Z4G5 72 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Smlr1J3QMJ4 66 aa12.84□□□□□ -0.35
Col18a1-202ENSMUST00000081654 Trip12G5E870 2025 aaKnown RBP12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Rnf183Q8QZS5 190 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Ighv1-52A0A0A6YXC3 117 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Defa4P28311 92 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Slc25a48Q8BW66 306 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Card19Q9D1I2 183 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Ighv1-50A0A075B5W1 117 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm17677B3GLJ5 116 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm12169F2Z474 250 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 P01643 108 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Tdgf1P51865 171 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Cysrt1Q9D1E4 142 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Tmem14cQ9CQN6 114 aa12.83□□□□□ -0.36
Col18a1-202ENSMUST00000081654 SonQ9QX47 2444 aaKnown RBP12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 SeboxP70368 190 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm21370Q3T9V6 190 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Arfgef3Q3UGY8 2170 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm5129F6YHA9 99 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 UrahQ9CRB3 118 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Mfap4Q9D1H9 257 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Sdhaf1Q3U276 118 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 A930003A15RikQ3U552 87 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 C730034F03RikQ8BGL5 111 aa12.82□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Col24a1Q30D77 1733 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 CadB2RQC6 2225 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 GfyJ3KML8 504 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm6040Q4QY32 63 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm9513B3GLJ6 99 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 P01739 132 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 P04943 107 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Pxt1Q8K459 51 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Brd3osA0A1B0GRB6 84 aa12.81□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Trav14-3A0A075B607 120 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Trav14-2A0A075B694 121 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Ndufc2Q9CQ54 120 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 SNORCQ9CXL7 121 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Tmem263Q9DAM7 115 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm20708H3BKF4 155 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Map6d1Q14BB9 191 aa12.8□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm16381A0A1Y7VKT9 73 aa12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Pip4p1Q3TWL2 284 aa12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Il22ra2Q80XF5 230 aa12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm9747Q810H1 104 aa12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Isg15Q64339 161 aaKnown RBP12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm26727M0QWT1 121 aa12.79□□□□□ -0.36
Col18a1-202ENSMUST00000081654 MalO09198 153 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 9130230L23RikQ8CC80 163 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 TectaO08523 2155 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Igkv4-62A0A0G2JDW9 117 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 LbhQ9CX60 105 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 CckP09240 115 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Defa20Q45VN2 95 aa12.78□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Gm15127B1AVZ5 449 aa12.77□□□□□ -0.36
Col18a1-202ENSMUST00000081654 P01793 123 aa12.77□□□□□ -0.36
Col18a1-202ENSMUST00000081654 Trav14d-1A0A075B6B1 121 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 PolP10400 120 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Col5a3Q9JLI2 1739 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 CtsbP10605 339 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Prop1P97458 223 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Gemin7Q9CWY4 129 aa12.77□□□□□ -0.37
Col18a1-202ENSMUST00000081654 P01750 117 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Hoxb4P10284 250 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Nbl1Q61477 178 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 4930442H23RikQ9D5G7 103 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Gm5089A1L3C8 106 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Plxnb3Q9QY40 1902 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Cox17P56394 63 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Ifitm1Q9D103 106 aa12.76□□□□□ -0.37
Col18a1-202ENSMUST00000081654 Shisal2aA2A9G7 189 aa12.75□□□□□ -0.37
Col18a1-202ENSMUST00000081654 CtsgP28293 261 aa12.75□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 102.4 ms