Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trav14d-1A0A075B6B1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Trav14d-1A0A075B6B1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trav14d-1A0A075B6B1 Gm25239-201ENSMUST00000174915 86 ntBASIC24.47■■□□□ 1.51
Trav14d-1A0A075B6B1 Psd-208ENSMUST00000224556 2034 ntBASIC24.4■■□□□ 1.5
Trav14d-1A0A075B6B1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trav14d-1A0A075B6B1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Trav14d-1A0A075B6B1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav14d-1A0A075B6B1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trav14d-1A0A075B6B1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trav14d-1A0A075B6B1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trav14d-1A0A075B6B1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trav14d-1A0A075B6B1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trav14d-1A0A075B6B1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trav14d-1A0A075B6B1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav14d-1A0A075B6B1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trav14d-1A0A075B6B1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Trav14d-1A0A075B6B1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.69■■□□□ 1.22
Trav14d-1A0A075B6B1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Trav14d-1A0A075B6B1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trav14d-1A0A075B6B1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trav14d-1A0A075B6B1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav14d-1A0A075B6B1 Gm15042-201ENSMUST00000120212 883 ntBASIC22.3■■□□□ 1.16
Trav14d-1A0A075B6B1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav14d-1A0A075B6B1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trav14d-1A0A075B6B1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.17■■□□□ 1.14
Trav14d-1A0A075B6B1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trav14d-1A0A075B6B1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trav14d-1A0A075B6B1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trav14d-1A0A075B6B1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav14d-1A0A075B6B1 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.98■■□□□ 1.11
Trav14d-1A0A075B6B1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.97■■□□□ 1.11
Trav14d-1A0A075B6B1 Gm15045-201ENSMUST00000117359 883 ntBASIC21.96■■□□□ 1.11
Trav14d-1A0A075B6B1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trav14d-1A0A075B6B1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.92■■□□□ 1.1
Trav14d-1A0A075B6B1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.92■■□□□ 1.1
Trav14d-1A0A075B6B1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav14d-1A0A075B6B1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trav14d-1A0A075B6B1 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.88■■□□□ 1.09
Trav14d-1A0A075B6B1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav14d-1A0A075B6B1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav14d-1A0A075B6B1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav14d-1A0A075B6B1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav14d-1A0A075B6B1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav14d-1A0A075B6B1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav14d-1A0A075B6B1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav14d-1A0A075B6B1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trav14d-1A0A075B6B1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav14d-1A0A075B6B1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav14d-1A0A075B6B1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.55■■□□□ 1.04
Trav14d-1A0A075B6B1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav14d-1A0A075B6B1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav14d-1A0A075B6B1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav14d-1A0A075B6B1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav14d-1A0A075B6B1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav14d-1A0A075B6B1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav14d-1A0A075B6B1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav14d-1A0A075B6B1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trav14d-1A0A075B6B1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav14d-1A0A075B6B1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav14d-1A0A075B6B1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav14d-1A0A075B6B1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trav14d-1A0A075B6B1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav14d-1A0A075B6B1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.11■□□□□ 0.97
Trav14d-1A0A075B6B1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav14d-1A0A075B6B1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav14d-1A0A075B6B1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav14d-1A0A075B6B1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Trav14d-1A0A075B6B1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Trav14d-1A0A075B6B1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav14d-1A0A075B6B1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav14d-1A0A075B6B1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trav14d-1A0A075B6B1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav14d-1A0A075B6B1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.83■□□□□ 0.92
Trav14d-1A0A075B6B1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav14d-1A0A075B6B1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav14d-1A0A075B6B1 Gm24109-201ENSMUST00000175489 103 ntBASIC20.8■□□□□ 0.92
Trav14d-1A0A075B6B1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav14d-1A0A075B6B1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav14d-1A0A075B6B1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav14d-1A0A075B6B1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav14d-1A0A075B6B1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav14d-1A0A075B6B1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav14d-1A0A075B6B1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav14d-1A0A075B6B1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav14d-1A0A075B6B1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav14d-1A0A075B6B1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trav14d-1A0A075B6B1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav14d-1A0A075B6B1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav14d-1A0A075B6B1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav14d-1A0A075B6B1 Gm23366-201ENSMUST00000175022 89 ntBASIC20.57■□□□□ 0.88
Trav14d-1A0A075B6B1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.55■□□□□ 0.88
Trav14d-1A0A075B6B1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav14d-1A0A075B6B1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav14d-1A0A075B6B1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trav14d-1A0A075B6B1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav14d-1A0A075B6B1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav14d-1A0A075B6B1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.48■□□□□ 0.87
Trav14d-1A0A075B6B1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav14d-1A0A075B6B1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms