RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Trav12d-3A0A075B6A4 115 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm29289A0A087WPY7 166 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm4064A0A087WR82 380 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm10352B2RWR6 380 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Nxph4G3X9N5 304 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Gm21693J3QK27 380 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Rbmy1a1O35698 380 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Pip4p1Q3TWL2 284 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Phlda3Q9WV95 125 aa11.03□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Trav6-6A0A075B603 114 aa11.02□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 P01790 122 aa11.02□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 P04942 107 aa11.02□□□□□ -0.64
Pcdha1-202ENSMUST00000193839 Nat8b-psE0CYC6 232 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm20708H3BKF4 155 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Defa1P11477 93 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Map6d1Q14BB9 191 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 4930596D02RikQ3V0H9 216 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Olfr477Q8VGI6 310 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Them7Q9DCP4 223 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Ighv1-58A0A075B5W9 117 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 P01788 123 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Minos1Q7TNS2 76 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 MrapQ9D159 127 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Pgpep1Q9ESW8 209 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm35549A0A0N4SUS7 141 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm10188Q3V432 135 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Cmc4Q61908 68 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 VsirQ9D659 308 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 HilpdaQ9JLS0 64 aa11.02□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Trav14-3A0A075B607 120 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Trav14n-2A0A0G2JDF5 121 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gpr82Q8BZR0 328 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Fbxl15Q91W61 300 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 3110018I06RikQ9CXS0 120 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Phpt1Q9DAK9 124 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm21370Q3T9V6 190 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Prr12E9PYL2 2035 aaKnown RBP11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm36368A0A1D5RLK8 91 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 E030018B13RikJ3QMS9 113 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 TtrP07309 147 aa11.01□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 AtrxQ61687 2476 aaKnown RBP11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm11444F6QMA6 170 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Prop1P97458 223 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Lsm4Q9QXA5 137 aaKnown RBP11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 P03980 138 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Zfp36l1P23950 338 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Il19Q8CJ70 176 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gemin7Q9CWY4 129 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 SNORCQ9CXL7 121 aa11□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Chac1Q8R3J5 223 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Tomm6Q9CQN3 74 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Igkv4-91A0A075B5L2 119 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Trav9-1A0A075B601 112 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Defb26Q30KN7 186 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Defa23Q5G866 93 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Zc2hc1aQ8BJH1 324 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 P01727 129 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Defa2P28309 93 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Defb18Q30KP5 85 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Atp6v0bQ91V37 205 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Sigmar1O55242 223 aa10.99□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Ss18Q62280 418 aa10.98□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Shisa9Q9CZN4 424 aa10.98□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Trav7-1A0A0G2JEV5 112 aa10.98□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 P01736 120 aa10.98□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Tm2d1Q99MB3 208 aa10.98□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 P04943 107 aa10.97□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 AcacbE9Q4Z2 2448 aa10.97□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm5294J3QP53 216 aa10.97□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 AY761184Q9D848 116 aa10.97□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Tnfrsf13bQ9ET35 249 aa10.97□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Med12A2AGH6 2190 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Ighv1-80A0A075B5Y3 117 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Gm6871L7N248 545 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Insl3O09107 122 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 H2-DMb1P35737 261 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 Ociad2Q9D8W7 154 aa10.96□□□□□ -0.65
Pcdha1-202ENSMUST00000193839 SrcapA0A087WQ44 3271 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 P01787 123 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Mllt11P97783 90 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Clec4b2Q67DU8 208 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Igkv4-90A0A075B5L3 117 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ccl21aP84444 133 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ccl21bP86792 133 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ccl21cP86793 133 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 4930544G11RikQ9CR99 193 aa10.96□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Trav4n-4A0A075B615 110 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Tcrg-C3L7N479 172 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 P03985 172 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Trav7-2Q5R1I3 112 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Tctex1d4Q8CDY7 219 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 8030423J24RikQ9CX45 142 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 PpbpQ9EQI5 113 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Tcrg-C1A0A075B5Z0 172 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ighv1-39A0A075B5V5 117 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Gm15127B1AVZ5 449 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Gm10521E9PZK0 135 aa10.95□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Trav14-2A0A075B694 121 aa10.94□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ccl25O35903 144 aa10.94□□□□□ -0.66
Pcdha1-202ENSMUST00000193839 Ly86O88188 162 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms