Protein–RNA interactions for Protein: A0A075B5V5

Ighv1-39, Immunoglobulin heavy variable 1-39 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-39A0A075B5V5 Gm25239-201ENSMUST00000174915 86 ntBASIC28.34■■■□□ 2.13
Ighv1-39A0A075B5V5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ighv1-39A0A075B5V5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Ighv1-39A0A075B5V5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Ighv1-39A0A075B5V5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Ighv1-39A0A075B5V5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ighv1-39A0A075B5V5 Psd-208ENSMUST00000224556 2034 ntBASIC25.34■■□□□ 1.65
Ighv1-39A0A075B5V5 Gm15042-201ENSMUST00000120212 883 ntBASIC25.13■■□□□ 1.61
Ighv1-39A0A075B5V5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ighv1-39A0A075B5V5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ighv1-39A0A075B5V5 Gm15045-201ENSMUST00000117359 883 ntBASIC24.59■■□□□ 1.53
Ighv1-39A0A075B5V5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ighv1-39A0A075B5V5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ighv1-39A0A075B5V5 Gm24109-201ENSMUST00000175489 103 ntBASIC24.38■■□□□ 1.49
Ighv1-39A0A075B5V5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ighv1-39A0A075B5V5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ighv1-39A0A075B5V5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv1-39A0A075B5V5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ighv1-39A0A075B5V5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ighv1-39A0A075B5V5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.01■■□□□ 1.43
Ighv1-39A0A075B5V5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ighv1-39A0A075B5V5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ighv1-39A0A075B5V5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv1-39A0A075B5V5 Gm23366-201ENSMUST00000175022 89 ntBASIC23.77■■□□□ 1.4
Ighv1-39A0A075B5V5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-39A0A075B5V5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ighv1-39A0A075B5V5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv1-39A0A075B5V5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ighv1-39A0A075B5V5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv1-39A0A075B5V5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ighv1-39A0A075B5V5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-39A0A075B5V5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv1-39A0A075B5V5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv1-39A0A075B5V5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv1-39A0A075B5V5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Ighv1-39A0A075B5V5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ighv1-39A0A075B5V5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ighv1-39A0A075B5V5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.32■■□□□ 1.32
Ighv1-39A0A075B5V5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ighv1-39A0A075B5V5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-39A0A075B5V5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.17■■□□□ 1.3
Ighv1-39A0A075B5V5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ighv1-39A0A075B5V5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.13■■□□□ 1.29
Ighv1-39A0A075B5V5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ighv1-39A0A075B5V5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.05■■□□□ 1.28
Ighv1-39A0A075B5V5 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.92■■□□□ 1.26
Ighv1-39A0A075B5V5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-39A0A075B5V5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-39A0A075B5V5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.78■■□□□ 1.24
Ighv1-39A0A075B5V5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.7■■□□□ 1.22
Ighv1-39A0A075B5V5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ighv1-39A0A075B5V5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ighv1-39A0A075B5V5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ighv1-39A0A075B5V5 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.61■■□□□ 1.21
Ighv1-39A0A075B5V5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.52■■□□□ 1.2
Ighv1-39A0A075B5V5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ighv1-39A0A075B5V5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-39A0A075B5V5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv1-39A0A075B5V5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ighv1-39A0A075B5V5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Ighv1-39A0A075B5V5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-39A0A075B5V5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Ighv1-39A0A075B5V5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv1-39A0A075B5V5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv1-39A0A075B5V5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv1-39A0A075B5V5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv1-39A0A075B5V5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv1-39A0A075B5V5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.27■■□□□ 1.16
Ighv1-39A0A075B5V5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ighv1-39A0A075B5V5 Gm25238-201ENSMUST00000174914 89 ntBASIC22.24■■□□□ 1.15
Ighv1-39A0A075B5V5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv1-39A0A075B5V5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-39A0A075B5V5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.21■■□□□ 1.15
Ighv1-39A0A075B5V5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ighv1-39A0A075B5V5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ighv1-39A0A075B5V5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Ighv1-39A0A075B5V5 Gm27325-201ENSMUST00000175467 74 ntBASIC22.08■■□□□ 1.13
Ighv1-39A0A075B5V5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ighv1-39A0A075B5V5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv1-39A0A075B5V5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-39A0A075B5V5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ighv1-39A0A075B5V5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.99■■□□□ 1.11
Ighv1-39A0A075B5V5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ighv1-39A0A075B5V5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.98■■□□□ 1.11
Ighv1-39A0A075B5V5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Ighv1-39A0A075B5V5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ighv1-39A0A075B5V5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-39A0A075B5V5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-39A0A075B5V5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Ighv1-39A0A075B5V5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv1-39A0A075B5V5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv1-39A0A075B5V5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ighv1-39A0A075B5V5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ighv1-39A0A075B5V5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-39A0A075B5V5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv1-39A0A075B5V5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ighv1-39A0A075B5V5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ighv1-39A0A075B5V5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.69■■□□□ 1.06
Ighv1-39A0A075B5V5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.69■■□□□ 1.06
Ighv1-39A0A075B5V5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms