Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Gm25239-201ENSMUST00000174915 86 ntBASIC26,77■■□□□ 1,88
Trav7-1A0A0G2JEV5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Trav7-1A0A0G2JEV5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Trav7-1A0A0G2JEV5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,64■■□□□ 1,7
Trav7-1A0A0G2JEV5 Psd-208ENSMUST00000224556 2034 ntBASIC24,85■■□□□ 1,57
Trav7-1A0A0G2JEV5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Trav7-1A0A0G2JEV5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
Trav7-1A0A0G2JEV5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Trav7-1A0A0G2JEV5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,2■■□□□ 1,46
Trav7-1A0A0G2JEV5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Trav7-1A0A0G2JEV5 Gm15042-201ENSMUST00000120212 883 ntBASIC24,06■■□□□ 1,44
Trav7-1A0A0G2JEV5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,03■■□□□ 1,44
Trav7-1A0A0G2JEV5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Trav7-1A0A0G2JEV5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,81■■□□□ 1,4
Trav7-1A0A0G2JEV5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,76■■□□□ 1,39
Trav7-1A0A0G2JEV5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,76■■□□□ 1,39
Trav7-1A0A0G2JEV5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,75■■□□□ 1,39
Trav7-1A0A0G2JEV5 Gm15045-201ENSMUST00000117359 883 ntBASIC23,63■■□□□ 1,37
Trav7-1A0A0G2JEV5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,44■■□□□ 1,34
Trav7-1A0A0G2JEV5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,38■■□□□ 1,33
Trav7-1A0A0G2JEV5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,26■■□□□ 1,31
Trav7-1A0A0G2JEV5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,18■■□□□ 1,3
Trav7-1A0A0G2JEV5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,15■■□□□ 1,3
Trav7-1A0A0G2JEV5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,12■■□□□ 1,29
Trav7-1A0A0G2JEV5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,08■■□□□ 1,29
Trav7-1A0A0G2JEV5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Trav7-1A0A0G2JEV5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,06■■□□□ 1,28
Trav7-1A0A0G2JEV5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,05■■□□□ 1,28
Trav7-1A0A0G2JEV5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,03■■□□□ 1,28
Trav7-1A0A0G2JEV5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Trav7-1A0A0G2JEV5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,92■■□□□ 1,26
Trav7-1A0A0G2JEV5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,91■■□□□ 1,26
Trav7-1A0A0G2JEV5 Gm24109-201ENSMUST00000175489 103 ntBASIC22,9■■□□□ 1,26
Trav7-1A0A0G2JEV5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,9■■□□□ 1,26
Trav7-1A0A0G2JEV5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,83■■□□□ 1,25
Trav7-1A0A0G2JEV5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,77■■□□□ 1,24
Trav7-1A0A0G2JEV5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Trav7-1A0A0G2JEV5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,73■■□□□ 1,23
Trav7-1A0A0G2JEV5 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,56■■□□□ 1,2
Trav7-1A0A0G2JEV5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22,54■■□□□ 1,2
Trav7-1A0A0G2JEV5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Trav7-1A0A0G2JEV5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Trav7-1A0A0G2JEV5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,5■■□□□ 1,19
Trav7-1A0A0G2JEV5 Gm23366-201ENSMUST00000175022 89 ntBASIC22,45■■□□□ 1,18
Trav7-1A0A0G2JEV5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,39■■□□□ 1,17
Trav7-1A0A0G2JEV5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Trav7-1A0A0G2JEV5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Trav7-1A0A0G2JEV5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,31■■□□□ 1,16
Trav7-1A0A0G2JEV5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Trav7-1A0A0G2JEV5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22,22■■□□□ 1,15
Trav7-1A0A0G2JEV5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Trav7-1A0A0G2JEV5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,1■■□□□ 1,13
Trav7-1A0A0G2JEV5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,1■■□□□ 1,13
Trav7-1A0A0G2JEV5 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,07■■□□□ 1,12
Trav7-1A0A0G2JEV5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,04■■□□□ 1,12
Trav7-1A0A0G2JEV5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Trav7-1A0A0G2JEV5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Trav7-1A0A0G2JEV5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,99■■□□□ 1,11
Trav7-1A0A0G2JEV5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Trav7-1A0A0G2JEV5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,96■■□□□ 1,11
Trav7-1A0A0G2JEV5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21,96■■□□□ 1,11
Trav7-1A0A0G2JEV5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,95■■□□□ 1,1
Trav7-1A0A0G2JEV5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,94■■□□□ 1,1
Trav7-1A0A0G2JEV5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,94■■□□□ 1,1
Trav7-1A0A0G2JEV5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Trav7-1A0A0G2JEV5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Trav7-1A0A0G2JEV5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,81■■□□□ 1,08
Trav7-1A0A0G2JEV5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,8■■□□□ 1,08
Trav7-1A0A0G2JEV5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,72■■□□□ 1,07
Trav7-1A0A0G2JEV5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,7■■□□□ 1,06
Trav7-1A0A0G2JEV5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,69■■□□□ 1,06
Trav7-1A0A0G2JEV5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21,66■■□□□ 1,06
Trav7-1A0A0G2JEV5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,65■■□□□ 1,06
Trav7-1A0A0G2JEV5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,59■■□□□ 1,05
Trav7-1A0A0G2JEV5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,58■■□□□ 1,05
Trav7-1A0A0G2JEV5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Trav7-1A0A0G2JEV5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,53■■□□□ 1,04
Trav7-1A0A0G2JEV5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Trav7-1A0A0G2JEV5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,45■■□□□ 1,02
Trav7-1A0A0G2JEV5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,42■■□□□ 1,02
Trav7-1A0A0G2JEV5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Trav7-1A0A0G2JEV5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Trav7-1A0A0G2JEV5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,36■■□□□ 1,01
Trav7-1A0A0G2JEV5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,29■■□□□ 1
Trav7-1A0A0G2JEV5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Trav7-1A0A0G2JEV5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Trav7-1A0A0G2JEV5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,27■■□□□ 1
Trav7-1A0A0G2JEV5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,27■■□□□ 1
Trav7-1A0A0G2JEV5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Trav7-1A0A0G2JEV5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Trav7-1A0A0G2JEV5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Trav7-1A0A0G2JEV5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Trav7-1A0A0G2JEV5 Gm27325-201ENSMUST00000175467 74 ntBASIC21,19■□□□□ 0,98
Trav7-1A0A0G2JEV5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Trav7-1A0A0G2JEV5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,16■□□□□ 0,98
Trav7-1A0A0G2JEV5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Trav7-1A0A0G2JEV5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21,13■□□□□ 0,97
Trav7-1A0A0G2JEV5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21,13■□□□□ 0,97
Trav7-1A0A0G2JEV5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Trav7-1A0A0G2JEV5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
Retrieved 100 of 76,532 protein–RNA pairs in 11,9 ms