Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Gm25239-201ENSMUST00000174915 86 ntBASIC27,93■■■□□ 2,06
Igkv4-90A0A075B5L3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Igkv4-90A0A075B5L3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Igkv4-90A0A075B5L3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25,6■■□□□ 1,69
Igkv4-90A0A075B5L3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,58■■□□□ 1,69
Igkv4-90A0A075B5L3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Igkv4-90A0A075B5L3 Gm15042-201ENSMUST00000120212 883 ntBASIC24,89■■□□□ 1,58
Igkv4-90A0A075B5L3 Psd-208ENSMUST00000224556 2034 ntBASIC24,62■■□□□ 1,53
Igkv4-90A0A075B5L3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Igkv4-90A0A075B5L3 Gm15045-201ENSMUST00000117359 883 ntBASIC24,44■■□□□ 1,5
Igkv4-90A0A075B5L3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24,18■■□□□ 1,46
Igkv4-90A0A075B5L3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24,09■■□□□ 1,45
Igkv4-90A0A075B5L3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,07■■□□□ 1,44
Igkv4-90A0A075B5L3 Gm24109-201ENSMUST00000175489 103 ntBASIC24,01■■□□□ 1,43
Igkv4-90A0A075B5L3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23,92■■□□□ 1,42
Igkv4-90A0A075B5L3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,73■■□□□ 1,39
Igkv4-90A0A075B5L3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,65■■□□□ 1,38
Igkv4-90A0A075B5L3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,63■■□□□ 1,37
Igkv4-90A0A075B5L3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,6■■□□□ 1,37
Igkv4-90A0A075B5L3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,56■■□□□ 1,36
Igkv4-90A0A075B5L3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,55■■□□□ 1,36
Igkv4-90A0A075B5L3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23,55■■□□□ 1,36
Igkv4-90A0A075B5L3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Igkv4-90A0A075B5L3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,52■■□□□ 1,36
Igkv4-90A0A075B5L3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,46■■□□□ 1,35
Igkv4-90A0A075B5L3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,44■■□□□ 1,34
Igkv4-90A0A075B5L3 Gm23366-201ENSMUST00000175022 89 ntBASIC23,39■■□□□ 1,33
Igkv4-90A0A075B5L3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
Igkv4-90A0A075B5L3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Igkv4-90A0A075B5L3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,26■■□□□ 1,31
Igkv4-90A0A075B5L3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,24■■□□□ 1,31
Igkv4-90A0A075B5L3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,22■■□□□ 1,31
Igkv4-90A0A075B5L3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23,22■■□□□ 1,31
Igkv4-90A0A075B5L3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23,21■■□□□ 1,31
Igkv4-90A0A075B5L3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,16■■□□□ 1,3
Igkv4-90A0A075B5L3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23,01■■□□□ 1,27
Igkv4-90A0A075B5L3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,91■■□□□ 1,26
Igkv4-90A0A075B5L3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Igkv4-90A0A075B5L3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22,87■■□□□ 1,25
Igkv4-90A0A075B5L3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,86■■□□□ 1,25
Igkv4-90A0A075B5L3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,81■■□□□ 1,24
Igkv4-90A0A075B5L3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,8■■□□□ 1,24
Igkv4-90A0A075B5L3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,68■■□□□ 1,22
Igkv4-90A0A075B5L3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,65■■□□□ 1,22
Igkv4-90A0A075B5L3 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,6■■□□□ 1,21
Igkv4-90A0A075B5L3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22,6■■□□□ 1,21
Igkv4-90A0A075B5L3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,55■■□□□ 1,2
Igkv4-90A0A075B5L3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Igkv4-90A0A075B5L3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,45■■□□□ 1,18
Igkv4-90A0A075B5L3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,42■■□□□ 1,18
Igkv4-90A0A075B5L3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Igkv4-90A0A075B5L3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22,28■■□□□ 1,16
Igkv4-90A0A075B5L3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,2■■□□□ 1,15
Igkv4-90A0A075B5L3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,15■■□□□ 1,14
Igkv4-90A0A075B5L3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,14
Igkv4-90A0A075B5L3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22,11■■□□□ 1,13
Igkv4-90A0A075B5L3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22,1■■□□□ 1,13
Igkv4-90A0A075B5L3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Igkv4-90A0A075B5L3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22,04■■□□□ 1,12
Igkv4-90A0A075B5L3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22,01■■□□□ 1,11
Igkv4-90A0A075B5L3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22,01■■□□□ 1,11
Igkv4-90A0A075B5L3 Gm42596-201ENSMUST00000196305 1958 ntBASIC22■■□□□ 1,11
Igkv4-90A0A075B5L3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22■■□□□ 1,11
Igkv4-90A0A075B5L3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Igkv4-90A0A075B5L3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Igkv4-90A0A075B5L3 Gm27325-201ENSMUST00000175467 74 ntBASIC21,91■■□□□ 1,1
Igkv4-90A0A075B5L3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,9■■□□□ 1,1
Igkv4-90A0A075B5L3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,89■■□□□ 1,1
Igkv4-90A0A075B5L3 Gm25238-201ENSMUST00000174914 89 ntBASIC21,89■■□□□ 1,09
Igkv4-90A0A075B5L3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21,86■■□□□ 1,09
Igkv4-90A0A075B5L3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Igkv4-90A0A075B5L3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21,82■■□□□ 1,08
Igkv4-90A0A075B5L3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Igkv4-90A0A075B5L3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Igkv4-90A0A075B5L3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,7■■□□□ 1,06
Igkv4-90A0A075B5L3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,7■■□□□ 1,06
Igkv4-90A0A075B5L3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21,69■■□□□ 1,06
Igkv4-90A0A075B5L3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,69■■□□□ 1,06
Igkv4-90A0A075B5L3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Igkv4-90A0A075B5L3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,66■■□□□ 1,06
Igkv4-90A0A075B5L3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,66■■□□□ 1,06
Igkv4-90A0A075B5L3 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Igkv4-90A0A075B5L3 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Igkv4-90A0A075B5L3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Igkv4-90A0A075B5L3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21,59■■□□□ 1,05
Igkv4-90A0A075B5L3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Igkv4-90A0A075B5L3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,54■■□□□ 1,04
Igkv4-90A0A075B5L3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Igkv4-90A0A075B5L3 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21,49■■□□□ 1,03
Igkv4-90A0A075B5L3 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Igkv4-90A0A075B5L3 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Igkv4-90A0A075B5L3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,46■■□□□ 1,03
Igkv4-90A0A075B5L3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21,46■■□□□ 1,03
Igkv4-90A0A075B5L3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21,45■■□□□ 1,02
Igkv4-90A0A075B5L3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21,4■■□□□ 1,02
Igkv4-90A0A075B5L3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,38■■□□□ 1,01
Igkv4-90A0A075B5L3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Igkv4-90A0A075B5L3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,36■■□□□ 1,01
Igkv4-90A0A075B5L3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,34■■□□□ 1,01
Igkv4-90A0A075B5L3 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21,34■■□□□ 1,01
Retrieved 100 of 76,532 protein–RNA pairs in 17,6 ms