RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	RAD16	P31244	790 aa		4.94	□□□□□ -1.62
APS1	YLR170C	SRB4	P32569	687 aa		4.94	□□□□□ -1.62
APS1	YLR170C	RRN6	P32786	894 aa		4.94	□□□□□ -1.62
APS1	YLR170C	YBR225W	P38321	900 aa		4.94	□□□□□ -1.62
APS1	YLR170C	HIS2	P38635	335 aa		4.94	□□□□□ -1.62
APS1	YLR170C	SFB3	P38810	929 aa		4.94	□□□□□ -1.62
APS1	YLR170C	CAJ1	P39101	391 aa		4.94	□□□□□ -1.62
APS1	YLR170C	OYE3	P41816	400 aa	Predicted RBP	4.94	□□□□□ -1.62
APS1	YLR170C	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
APS1	YLR170C	PSP1	P50896	841 aa	Known RBP	4.94	□□□□□ -1.62
APS1	YLR170C	DIG1	Q03063	452 aa	Known RBP	4.94	□□□□□ -1.62
APS1	YLR170C	HER2	Q03557	464 aa		4.94	□□□□□ -1.62
APS1	YLR170C	PRM6	Q04705	352 aa		4.94	□□□□□ -1.62
APS1	YLR170C	YDR278C	Q05612	105 aa		4.94	□□□□□ -1.62
APS1	YLR170C	HRD3	Q05787	833 aa		4.94	□□□□□ -1.62
APS1	YLR170C	YDL073W	Q07454	984 aa		4.94	□□□□□ -1.62
APS1	YLR170C	VPS5	Q92331	675 aa		4.94	□□□□□ -1.62
APS1	YLR170C	TUB3	P09734	445 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	MAS1	P10507	462 aa		4.93	□□□□□ -1.62
APS1	YLR170C	TRX1	P22217	103 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	SEC1	P30619	724 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
APS1	YLR170C	YEL043W	P32618	956 aa		4.93	□□□□□ -1.62
APS1	YLR170C	GCG1	P32656	232 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	SRB2	P34162	210 aa		4.93	□□□□□ -1.62
APS1	YLR170C	RRT2	P38332	387 aa		4.93	□□□□□ -1.62
APS1	YLR170C	LCP5	P40079	357 aa	Predicted RBP	4.93	□□□□□ -1.62
APS1	YLR170C	BTT1	P40314	149 aa	Predicted RBP	4.93	□□□□□ -1.62
APS1	YLR170C	RPT2	P40327	437 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	CDC1	P40986	491 aa		4.93	□□□□□ -1.62
APS1	YLR170C	GUF1	P46943	645 aa		4.93	□□□□□ -1.62
APS1	YLR170C	APT1	P49435	187 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	MAL13	P53338	473 aa		4.93	□□□□□ -1.62
APS1	YLR170C	YNL247W	P53852	767 aa	Known RBP	4.93	□□□□□ -1.62
APS1	YLR170C	MTG1	Q03151	367 aa	Predicted RBP	4.93	□□□□□ -1.62
APS1	YLR170C	DDC1	Q08949	612 aa		4.93	□□□□□ -1.62
APS1	YLR170C	YPQ1	Q12010	308 aa		4.93	□□□□□ -1.62
APS1	YLR170C	DAP1	Q12091	152 aa		4.93	□□□□□ -1.62
APS1	YLR170C	EMP46	Q12396	444 aa		4.93	□□□□□ -1.62
APS1	YLR170C	YLR462W	O13556	202 aa		4.92	□□□□□ -1.62
APS1	YLR170C	RAD10	P06838	210 aa		4.92	□□□□□ -1.62
APS1	YLR170C	PEX1	P24004	1043 aa		4.92	□□□□□ -1.62
APS1	YLR170C	LRE1	P25579	583 aa	Known RBP	4.92	□□□□□ -1.62
APS1	YLR170C	DBF4	P32325	704 aa		4.92	□□□□□ -1.62
APS1	YLR170C	SFA1	P32771	386 aa		4.92	□□□□□ -1.62
APS1	YLR170C	HSP78	P33416	811 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YBL055C	P34220	418 aa	Predicted RBP	4.92	□□□□□ -1.62
APS1	YLR170C	YBR056W	P38081	501 aa		4.92	□□□□□ -1.62
APS1	YLR170C	ECM13	P38195	257 aa		4.92	□□□□□ -1.62
APS1	YLR170C	FUI1	P38196	639 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YHL049C	P38722	271 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YHR131C	P38835	850 aa		4.92	□□□□□ -1.62
APS1	YLR170C	PEX28	P38848	579 aa		4.92	□□□□□ -1.62
APS1	YLR170C	AVT2	P39981	480 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YER189W	P40104	122 aa		4.92	□□□□□ -1.62
APS1	YLR170C	ARG2	P40360	574 aa		4.92	□□□□□ -1.62
APS1	YLR170C	MOB1	P40484	314 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YIL054W	P40524	105 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YFL064C	P43540	174 aa		4.92	□□□□□ -1.62
APS1	YLR170C	BRO1	P48582	844 aa		4.92	□□□□□ -1.62
APS1	YLR170C	PEX31	P53203	462 aa		4.92	□□□□□ -1.62
APS1	YLR170C	RPL22B	P56628	122 aa	Known RBP	4.92	□□□□□ -1.62
APS1	YLR170C	CDC55	Q00362	526 aa		4.92	□□□□□ -1.62
APS1	YLR170C	THI7	Q05998	598 aa		4.92	□□□□□ -1.62
APS1	YLR170C	PMT7	Q06644	662 aa		4.92	□□□□□ -1.62
APS1	YLR170C	BRE4	Q07660	1125 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YLR001C	Q07895	862 aa		4.92	□□□□□ -1.62
APS1	YLR170C	FMP25	Q08023	583 aa		4.92	□□□□□ -1.62
APS1	YLR170C	SGO1	Q08490	590 aa		4.92	□□□□□ -1.62
APS1	YLR170C	NDJ1	Q12366	352 aa		4.92	□□□□□ -1.62
APS1	YLR170C	RMP1	Q12530	201 aa		4.92	□□□□□ -1.62
APS1	YLR170C	YBL111C	Q3E7Y5	667 aa		4.92	□□□□□ -1.62
APS1	YLR170C	ENO2	P00925	437 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	PMS1	P14242	873 aa		4.91	□□□□□ -1.62
APS1	YLR170C	DPB3	P27344	201 aa		4.91	□□□□□ -1.62
APS1	YLR170C	GYP6	P32806	458 aa		4.91	□□□□□ -1.62
APS1	YLR170C	SEG2	P34250	1132 aa		4.91	□□□□□ -1.62
APS1	YLR170C	HSL7	P38274	827 aa		4.91	□□□□□ -1.62
APS1	YLR170C	PCA1	P38360	1216 aa		4.91	□□□□□ -1.62
APS1	YLR170C	CBR1	P38626	284 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	NMD3	P38861	518 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	SMF1	P38925	575 aa		4.91	□□□□□ -1.62
APS1	YLR170C	END3	P39013	349 aa		4.91	□□□□□ -1.62
APS1	YLR170C	NUP60	P39705	539 aa		4.91	□□□□□ -1.62
APS1	YLR170C	KTR7	P40504	517 aa		4.91	□□□□□ -1.62
APS1	YLR170C	RPL34B	P40525	121 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	OSW7	P43611	510 aa		4.91	□□□□□ -1.62
APS1	YLR170C	RIM8	P53179	542 aa		4.91	□□□□□ -1.62
APS1	YLR170C	JJJ1	P53863	590 aa		4.91	□□□□□ -1.62
APS1	YLR170C	LEE1	Q02799	301 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	UFO1	Q04511	668 aa		4.91	□□□□□ -1.62
APS1	YLR170C	IVY1	Q04934	453 aa		4.91	□□□□□ -1.62
APS1	YLR170C	ECM38	Q05902	660 aa	Predicted RBP	4.91	□□□□□ -1.62
APS1	YLR170C	GRX8	Q05926	109 aa		4.91	□□□□□ -1.62
APS1	YLR170C	YLR257W	Q06146	321 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	YOR059C	Q08448	450 aa	Known RBP	4.91	□□□□□ -1.62
APS1	YLR170C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
APS1	YLR170C	GPM3	Q12326	303 aa		4.91	□□□□□ -1.62
APS1	YLR170C	SPO21	Q12411	609 aa		4.91	□□□□□ -1.62
APS1	YLR170C	Q0182	Q9ZZW1	134 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms