RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	LTE1	P07866	1435 aa		4.7	□□□□□ -1.66
RPO21	YDL140C	RRP8	P38961	392 aa	Known RBP	4.7	□□□□□ -1.66
RPO21	YDL140C	ENV11	P53246	860 aa		4.7	□□□□□ -1.66
RPO21	YDL140C	KAR2	P16474	682 aa	Known RBP	4.69	□□□□□ -1.66
RPO21	YDL140C	YFR016C	P43597	1233 aa	Known RBP	4.69	□□□□□ -1.66
RPO21	YDL140C	SEC20	P28791	383 aa		4.69	□□□□□ -1.66
RPO21	YDL140C	DAL5	P15365	543 aa		4.69	□□□□□ -1.66
RPO21	YDL140C	CSE4	P36012	229 aa		4.69	□□□□□ -1.66
RPO21	YDL140C	IMH1	Q06704	911 aa	Known RBP	4.69	□□□□□ -1.66
RPO21	YDL140C	PWP2	P25635	923 aa	Known RBP	4.67	□□□□□ -1.66
RPO21	YDL140C	ORC1	P54784	914 aa	Predicted RBP	4.67	□□□□□ -1.66
RPO21	YDL140C	TOP2	P06786	1428 aa	Known RBP	4.67	□□□□□ -1.66
RPO21	YDL140C	BUG1	Q12191	341 aa		4.67	□□□□□ -1.66
RPO21	YDL140C	NCB2	Q92317	146 aa		4.67	□□□□□ -1.66
RPO21	YDL140C	COG8	Q04632	607 aa		4.66	□□□□□ -1.66
RPO21	YDL140C	MNN4	P36044	1178 aa		4.66	□□□□□ -1.66
RPO21	YDL140C	KRI1	P42846	591 aa	Known RBP	4.66	□□□□□ -1.66
RPO21	YDL140C	ZDS2	P54786	942 aa		4.66	□□□□□ -1.66
RPO21	YDL140C	PRP45	P28004	379 aa	Predicted RBP	4.65	□□□□□ -1.67
RPO21	YDL140C	KGD2	P19262	463 aa	Predicted RBP	4.65	□□□□□ -1.67
RPO21	YDL140C	RLF2	Q12495	606 aa		4.65	□□□□□ -1.67
RPO21	YDL140C	SSN2	P38931	1420 aa		4.64	□□□□□ -1.67
RPO21	YDL140C	DIB1	Q06819	143 aa	Predicted RBP	4.64	□□□□□ -1.67
RPO21	YDL140C	TCB1	Q12466	1186 aa		4.64	□□□□□ -1.67
RPO21	YDL140C	SSA2	P10592	639 aa	Known RBP	4.64	□□□□□ -1.67
RPO21	YDL140C	NSE3	Q05541	303 aa		4.64	□□□□□ -1.67
RPO21	YDL140C	BRE1	Q07457	700 aa	Known RBP	4.64	□□□□□ -1.67
RPO21	YDL140C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
RPO21	YDL140C	RPP2B	P02400	110 aa	Known RBP	4.63	□□□□□ -1.67
RPO21	YDL140C	PDI1	P17967	522 aa	Known RBP	4.63	□□□□□ -1.67
RPO21	YDL140C	SER1	P33330	395 aa	Known RBP	4.63	□□□□□ -1.67
RPO21	YDL140C	RGD1	P38339	666 aa		4.63	□□□□□ -1.67
RPO21	YDL140C	MCM6	P53091	1017 aa	Known RBP	4.63	□□□□□ -1.67
RPO21	YDL140C	SMC1	P32908	1225 aa		4.62	□□□□□ -1.67
RPO21	YDL140C	RRD1	P40454	393 aa	Known RBP	4.62	□□□□□ -1.67
RPO21	YDL140C	CRF1	Q04930	467 aa		4.62	□□□□□ -1.67
RPO21	YDL140C	TOP1	P04786	769 aa		4.62	□□□□□ -1.67
RPO21	YDL140C	YBP2	P53169	641 aa		4.61	□□□□□ -1.67
RPO21	YDL140C	SLI15	P38283	698 aa		4.61	□□□□□ -1.67
RPO21	YDL140C	SAS4	Q04003	481 aa		4.61	□□□□□ -1.67
RPO21	YDL140C	SDH5	Q08230	162 aa		4.61	□□□□□ -1.67
RPO21	YDL140C	NOP53	Q12080	455 aa	Known RBP	4.61	□□□□□ -1.67
RPO21	YDL140C	RRI2	Q12348	645 aa		4.61	□□□□□ -1.67
RPO21	YDL140C	TPD3	P31383	635 aa		4.6	□□□□□ -1.67
RPO21	YDL140C	RAD26	P40352	1085 aa		4.6	□□□□□ -1.67
RPO21	YDL140C	VPS53	P47061	822 aa		4.6	□□□□□ -1.67
RPO21	YDL140C	PRP5	P21372	849 aa	Predicted RBP	4.6	□□□□□ -1.67
RPO21	YDL140C	YER156C	P40093	338 aa	Known RBP	4.6	□□□□□ -1.67
RPO21	YDL140C	MAK21	Q12176	1025 aa	Known RBP	4.6	□□□□□ -1.67
RPO21	YDL140C	MSM1	P22438	575 aa		4.6	□□□□□ -1.67
RPO21	YDL140C	YKR018C	P36114	725 aa		4.6	□□□□□ -1.67
RPO21	YDL140C	ITT1	Q04638	464 aa		4.59	□□□□□ -1.67
RPO21	YDL140C	SNU66	Q12420	587 aa	Predicted RBP	4.59	□□□□□ -1.67
RPO21	YDL140C	UBX2	Q04228	584 aa		4.59	□□□□□ -1.67
RPO21	YDL140C	GTT3	P39996	337 aa		4.59	□□□□□ -1.67
RPO21	YDL140C	FET4	P40988	552 aa		4.59	□□□□□ -1.68
RPO21	YDL140C	PEX21	P50091	288 aa		4.59	□□□□□ -1.68
RPO21	YDL140C	YGL081W	P53156	320 aa		4.59	□□□□□ -1.68
RPO21	YDL140C	GAL2	P13181	574 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	ATG1	P53104	897 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	AOS1	Q06624	347 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	CHD1	P32657	1468 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	SES1	P07284	462 aa	Known RBP	4.58	□□□□□ -1.68
RPO21	YDL140C	MSN5	P52918	1224 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	RMD1	Q03441	430 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	GRX6	Q12438	231 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	VAS1	P07806	1104 aa	Known RBP	4.58	□□□□□ -1.68
RPO21	YDL140C	ENT1	Q12518	454 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	XRN1	P22147	1528 aa	Known RBP	4.58	□□□□□ -1.68
RPO21	YDL140C	PSF3	Q12146	194 aa		4.58	□□□□□ -1.68
RPO21	YDL140C	DIP2	Q12220	943 aa	Predicted RBP	4.58	□□□□□ -1.68
RPO21	YDL140C	CFT1	Q06632	1357 aa	Known RBP	4.57	□□□□□ -1.68
RPO21	YDL140C	TAF8	Q03750	510 aa		4.57	□□□□□ -1.68
RPO21	YDL140C	YKL133C	P36066	463 aa		4.57	□□□□□ -1.68
RPO21	YDL140C	YIL055C	P40523	627 aa	Known RBP	4.57	□□□□□ -1.68
RPO21	YDL140C	SQS1	P53866	767 aa	Known RBP	4.57	□□□□□ -1.68
RPO21	YDL140C	MSB4	Q12317	492 aa		4.57	□□□□□ -1.68
RPO21	YDL140C	GRX4	P32642	244 aa		4.56	□□□□□ -1.68
RPO21	YDL140C	MCD4	P36051	919 aa		4.56	□□□□□ -1.68
RPO21	YDL140C	EDE1	P34216	1381 aa		4.56	□□□□□ -1.68
RPO21	YDL140C	RRP14	P36080	434 aa	Known RBP	4.56	□□□□□ -1.68
RPO21	YDL140C	BSD2	P38356	321 aa		4.56	□□□□□ -1.68
RPO21	YDL140C	NUP157	P40064	1391 aa	Known RBP	4.55	□□□□□ -1.68
RPO21	YDL140C	SWI6	P09959	803 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	ALD4	P46367	519 aa	Known RBP	4.55	□□□□□ -1.68
RPO21	YDL140C	YBL036C	P38197	257 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	BPT1	P14772	1559 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	DID4	P36108	232 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	IES2	P40154	320 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	THI12	P42883	340 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	THI5	P43534	340 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	THI11	P47183	340 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	PUS6	P53294	404 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	YNL035C	P53962	389 aa	Known RBP	4.55	□□□□□ -1.68
RPO21	YDL140C	THI13	Q07748	340 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	PAN1	P32521	1480 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	LEU2	P04173	364 aa	Predicted RBP	4.55	□□□□□ -1.68
RPO21	YDL140C	JIP4	Q03361	876 aa		4.55	□□□□□ -1.68
RPO21	YDL140C	HSL1	P34244	1518 aa		4.54	□□□□□ -1.68
RPO21	YDL140C	RMT2	Q03305	412 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms