RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 CrygcQ61597 174 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Msrb3Q8BU85 253 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Olfr1102Q8VES2 324 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Olfr1440Q8VFV4 315 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Olfr992Q8VGC6 309 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Mus81Q91ZJ0 551 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Lcn8Q924P3 175 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Mrpl54Q9CPW3 135 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Chac2Q9CQG1 178 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 SdhdQ9CXV1 159 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Gar1Q9CY66 231 aaKnown RBP9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Cmss1Q9CZT6 276 aaKnown RBP9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Necap2Q9D1J1 266 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Alkbh7Q9D6Z0 221 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Tspan4Q9DCK3 238 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Nek7Q9ES74 302 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Crybb3Q9JJU9 211 aa9.28□□□□□ -0.92
Ccdc28b-202ENSMUST00000106035 Trbv31A0A075B5J5 111 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Trav6-4A0A075B6B4 115 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ighv1-67A0A0G2JFN9 117 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr543E9PWI5 336 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Tspan15F7BWT7 294 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 A930009A15RikG3UYI6 118 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gm20830J3KML6 227 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Rhox6O70238 227 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 DaoP18894 345 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 CtdsplP58465 276 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 CenptQ3TJM4 515 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Jagn1Q5XKN4 183 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Stoml3Q6PE84 287 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Jpt2Q6PGH2 190 aaKnown RBP9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Q6PIU9 354 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gal3st2Q6XQH0 394 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Vma21Q78T54 101 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Slamf7Q8BHK6 333 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Elp5Q99L85 300 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Lap3Q9CPY7 519 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Rchy1Q9CR50 261 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 SNORCQ9CXL7 121 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Arv1Q9D0U9 266 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Wdr61Q9ERF3 305 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ccl28Q9JIL2 130 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 PlpbpQ9Z2Y8 274 aa9.27□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ighv1-39A0A075B5V5 117 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ccnb1ip1D3Z3K2 276 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 P06323 132 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Tcte3P11985 191 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gsc2P56916 198 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Rtl4Q3URY0 304 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Scarb1Q61009 509 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Zc4h2Q68FG0 224 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Alkbh2Q6P6J4 239 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Onecut2Q6XBJ3 505 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr921Q7TRC0 313 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Pygo2Q80V76 405 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Scml4Q80VG1 408 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Slc16a13Q8CE94 428 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Poc1aQ8JZX3 405 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr523Q8VFE7 317 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr1183Q8VFF8 303 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr491Q8VG06 310 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gbgt1Q8VI38 347 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Etfrf1Q91V16 86 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ms4a6bQ99N09 244 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Spcs2Q9CYN2 226 aaKnown RBP9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Klk11Q9QYN3 276 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 SrrQ9QZX7 339 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Arl3Q9WUL7 182 aa9.26□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ighv1-52A0A0A6YXC3 117 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Irf2bp2E9Q1P8 570 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gm10251J3QPM5 127 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Tcf21O35437 179 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 P01915 264 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 CrygdP04342 174 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Hist1h1bP43276 223 aaKnown RBP9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 ElobP62869 118 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 CrygeQ03740 174 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr1242Q8VGM6 306 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Mrpl16Q99N93 251 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Clvs1Q9D4C9 354 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Derl3Q9D8K3 228 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Alg5Q9DB25 324 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Cxcr6Q9EQ16 351 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Mpdu1Q9R0Q9 247 aa9.25□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Akirin2B1AXD8 201 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Vmn1r194J3JS27 296 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Gpr33O88416 339 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Ercc1P07903 298 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Fabp6P51162 128 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Fabp5Q05816 135 aaKnown RBP9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 SbsnQ8CIT9 700 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Rnase2aQ8K196 155 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr860Q8VFF7 317 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr476Q8VGI4 310 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Atg5Q99J83 275 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Cldnd2Q9D9H2 167 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Trem1Q9JKE2 230 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Cbln1Q9R171 193 aa9.24□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 TgO08710 2766 aa9.23□□□□□ -0.93
Ccdc28b-202ENSMUST00000106035 Olfr1436A0PK57 315 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 111.3 ms