Protein–RNA interactions for Protein: Q9CR50

Rchy1, RING finger and CHY zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rchy1Q9CR50 Gm25239-201ENSMUST00000174915 86 ntBASIC28.53■■■□□ 2.16
Rchy1Q9CR50 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rchy1Q9CR50 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rchy1Q9CR50 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rchy1Q9CR50 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rchy1Q9CR50 Gm15042-201ENSMUST00000120212 883 ntBASIC25.2■■□□□ 1.62
Rchy1Q9CR50 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Rchy1Q9CR50 Gm15045-201ENSMUST00000117359 883 ntBASIC24.64■■□□□ 1.54
Rchy1Q9CR50 Gm24109-201ENSMUST00000175489 103 ntBASIC24.55■■□□□ 1.52
Rchy1Q9CR50 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rchy1Q9CR50 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rchy1Q9CR50 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rchy1Q9CR50 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rchy1Q9CR50 Psd-208ENSMUST00000224556 2034 ntBASIC24■■□□□ 1.43
Rchy1Q9CR50 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rchy1Q9CR50 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.91■■□□□ 1.42
Rchy1Q9CR50 Gm23366-201ENSMUST00000175022 89 ntBASIC23.88■■□□□ 1.41
Rchy1Q9CR50 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rchy1Q9CR50 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rchy1Q9CR50 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rchy1Q9CR50 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rchy1Q9CR50 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rchy1Q9CR50 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rchy1Q9CR50 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rchy1Q9CR50 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rchy1Q9CR50 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rchy1Q9CR50 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rchy1Q9CR50 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rchy1Q9CR50 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.28■■□□□ 1.32
Rchy1Q9CR50 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rchy1Q9CR50 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Rchy1Q9CR50 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rchy1Q9CR50 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.17■■□□□ 1.3
Rchy1Q9CR50 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.01■■□□□ 1.27
Rchy1Q9CR50 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rchy1Q9CR50 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rchy1Q9CR50 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.75■■□□□ 1.23
Rchy1Q9CR50 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rchy1Q9CR50 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rchy1Q9CR50 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rchy1Q9CR50 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.59■■□□□ 1.21
Rchy1Q9CR50 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Rchy1Q9CR50 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rchy1Q9CR50 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rchy1Q9CR50 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rchy1Q9CR50 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rchy1Q9CR50 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.41■■□□□ 1.18
Rchy1Q9CR50 Gm25238-201ENSMUST00000174914 89 ntBASIC22.4■■□□□ 1.18
Rchy1Q9CR50 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.39■■□□□ 1.17
Rchy1Q9CR50 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rchy1Q9CR50 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rchy1Q9CR50 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rchy1Q9CR50 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Rchy1Q9CR50 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rchy1Q9CR50 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.25■■□□□ 1.15
Rchy1Q9CR50 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rchy1Q9CR50 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rchy1Q9CR50 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rchy1Q9CR50 Gm27325-201ENSMUST00000175467 74 ntBASIC22.11■■□□□ 1.13
Rchy1Q9CR50 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rchy1Q9CR50 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.07■■□□□ 1.12
Rchy1Q9CR50 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rchy1Q9CR50 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rchy1Q9CR50 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rchy1Q9CR50 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.03■■□□□ 1.12
Rchy1Q9CR50 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
Rchy1Q9CR50 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rchy1Q9CR50 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Rchy1Q9CR50 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Rchy1Q9CR50 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.9■■□□□ 1.1
Rchy1Q9CR50 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rchy1Q9CR50 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rchy1Q9CR50 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rchy1Q9CR50 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rchy1Q9CR50 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rchy1Q9CR50 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.8■■□□□ 1.08
Rchy1Q9CR50 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rchy1Q9CR50 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.78■■□□□ 1.08
Rchy1Q9CR50 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.77■■□□□ 1.08
Rchy1Q9CR50 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rchy1Q9CR50 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rchy1Q9CR50 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rchy1Q9CR50 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rchy1Q9CR50 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Rchy1Q9CR50 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.58■■□□□ 1.05
Rchy1Q9CR50 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rchy1Q9CR50 Rab21-202ENSMUST00000218831 843 ntBASIC21.55■■□□□ 1.04
Rchy1Q9CR50 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rchy1Q9CR50 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rchy1Q9CR50 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rchy1Q9CR50 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rchy1Q9CR50 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.46■■□□□ 1.03
Rchy1Q9CR50 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.42■■□□□ 1.02
Rchy1Q9CR50 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rchy1Q9CR50 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rchy1Q9CR50 Gm25262-201ENSMUST00000174934 133 ntBASIC21.38■■□□□ 1.01
Rchy1Q9CR50 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rchy1Q9CR50 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rchy1Q9CR50 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rchy1Q9CR50 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 468.5 ms