Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Scml4Q80VG1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Scml4Q80VG1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Scml4Q80VG1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Scml4Q80VG1 Gm25239-201ENSMUST00000174915 86 ntBASIC28.19■■■□□ 2.1
Scml4Q80VG1 Psd-208ENSMUST00000224556 2034 ntBASIC27.94■■■□□ 2.06
Scml4Q80VG1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Scml4Q80VG1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scml4Q80VG1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Scml4Q80VG1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scml4Q80VG1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Scml4Q80VG1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Scml4Q80VG1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scml4Q80VG1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Scml4Q80VG1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scml4Q80VG1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scml4Q80VG1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Scml4Q80VG1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Scml4Q80VG1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Scml4Q80VG1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Scml4Q80VG1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scml4Q80VG1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scml4Q80VG1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.51■■□□□ 1.68
Scml4Q80VG1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Scml4Q80VG1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Scml4Q80VG1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Scml4Q80VG1 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.36■■□□□ 1.65
Scml4Q80VG1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scml4Q80VG1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scml4Q80VG1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Scml4Q80VG1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.28■■□□□ 1.64
Scml4Q80VG1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.25■■□□□ 1.63
Scml4Q80VG1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scml4Q80VG1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Scml4Q80VG1 Gm15042-201ENSMUST00000120212 883 ntBASIC24.97■■□□□ 1.59
Scml4Q80VG1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Scml4Q80VG1 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.85■■□□□ 1.57
Scml4Q80VG1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Scml4Q80VG1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Scml4Q80VG1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Scml4Q80VG1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Scml4Q80VG1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scml4Q80VG1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Scml4Q80VG1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.68■■□□□ 1.54
Scml4Q80VG1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Scml4Q80VG1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.59■■□□□ 1.53
Scml4Q80VG1 Gm15045-201ENSMUST00000117359 883 ntBASIC24.5■■□□□ 1.51
Scml4Q80VG1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Scml4Q80VG1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Scml4Q80VG1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Scml4Q80VG1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Scml4Q80VG1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Scml4Q80VG1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Scml4Q80VG1 Gm24109-201ENSMUST00000175489 103 ntBASIC24.31■■□□□ 1.48
Scml4Q80VG1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.27■■□□□ 1.48
Scml4Q80VG1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Scml4Q80VG1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Scml4Q80VG1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Scml4Q80VG1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Scml4Q80VG1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Scml4Q80VG1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Scml4Q80VG1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Scml4Q80VG1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scml4Q80VG1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Scml4Q80VG1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Scml4Q80VG1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Scml4Q80VG1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Scml4Q80VG1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scml4Q80VG1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Scml4Q80VG1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.98■■□□□ 1.43
Scml4Q80VG1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Scml4Q80VG1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Scml4Q80VG1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Scml4Q80VG1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.91■■□□□ 1.42
Scml4Q80VG1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Scml4Q80VG1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Scml4Q80VG1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Scml4Q80VG1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.85■■□□□ 1.41
Scml4Q80VG1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.85■■□□□ 1.41
Scml4Q80VG1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scml4Q80VG1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Scml4Q80VG1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Scml4Q80VG1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.78■■□□□ 1.4
Scml4Q80VG1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Scml4Q80VG1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scml4Q80VG1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Scml4Q80VG1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Scml4Q80VG1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Scml4Q80VG1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Scml4Q80VG1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scml4Q80VG1 Gm23366-201ENSMUST00000175022 89 ntBASIC23.62■■□□□ 1.37
Scml4Q80VG1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Scml4Q80VG1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scml4Q80VG1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Scml4Q80VG1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scml4Q80VG1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Scml4Q80VG1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Scml4Q80VG1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
Scml4Q80VG1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Scml4Q80VG1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms