Protein–RNA interactions for Protein: O35437

Tcf21, Transcription factor 21, mousemouse

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf21O35437 Gm25239-201ENSMUST00000174915 86 ntBASIC28.3■■■□□ 2.12
Tcf21O35437 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Tcf21O35437 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tcf21O35437 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Tcf21O35437 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tcf21O35437 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Tcf21O35437 Gm15042-201ENSMUST00000120212 883 ntBASIC24.61■■□□□ 1.53
Tcf21O35437 Gm24109-201ENSMUST00000175489 103 ntBASIC24.61■■□□□ 1.53
Tcf21O35437 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Tcf21O35437 Psd-208ENSMUST00000224556 2034 ntBASIC24.37■■□□□ 1.49
Tcf21O35437 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Tcf21O35437 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tcf21O35437 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tcf21O35437 Gm15045-201ENSMUST00000117359 883 ntBASIC23.95■■□□□ 1.42
Tcf21O35437 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tcf21O35437 Gm23366-201ENSMUST00000175022 89 ntBASIC23.69■■□□□ 1.38
Tcf21O35437 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tcf21O35437 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tcf21O35437 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tcf21O35437 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Tcf21O35437 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tcf21O35437 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcf21O35437 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tcf21O35437 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Tcf21O35437 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tcf21O35437 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Tcf21O35437 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tcf21O35437 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.99■■□□□ 1.27
Tcf21O35437 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tcf21O35437 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Tcf21O35437 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
Tcf21O35437 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tcf21O35437 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tcf21O35437 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tcf21O35437 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Tcf21O35437 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Tcf21O35437 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.76■■□□□ 1.23
Tcf21O35437 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tcf21O35437 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tcf21O35437 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tcf21O35437 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.58■■□□□ 1.21
Tcf21O35437 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tcf21O35437 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.51■■□□□ 1.19
Tcf21O35437 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tcf21O35437 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tcf21O35437 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tcf21O35437 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tcf21O35437 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tcf21O35437 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.37■■□□□ 1.17
Tcf21O35437 Gm25238-201ENSMUST00000174914 89 ntBASIC22.35■■□□□ 1.17
Tcf21O35437 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tcf21O35437 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Tcf21O35437 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tcf21O35437 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.22■■□□□ 1.15
Tcf21O35437 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcf21O35437 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Tcf21O35437 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Tcf21O35437 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tcf21O35437 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tcf21O35437 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Tcf21O35437 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tcf21O35437 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Tcf21O35437 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tcf21O35437 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.83■■□□□ 1.09
Tcf21O35437 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tcf21O35437 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tcf21O35437 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.79■■□□□ 1.08
Tcf21O35437 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.78■■□□□ 1.08
Tcf21O35437 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Tcf21O35437 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tcf21O35437 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.74■■□□□ 1.07
Tcf21O35437 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tcf21O35437 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tcf21O35437 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tcf21O35437 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Tcf21O35437 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.69■■□□□ 1.06
Tcf21O35437 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tcf21O35437 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.66■■□□□ 1.06
Tcf21O35437 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tcf21O35437 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tcf21O35437 Gm25262-201ENSMUST00000174934 133 ntBASIC21.62■■□□□ 1.05
Tcf21O35437 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Tcf21O35437 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.57■■□□□ 1.04
Tcf21O35437 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tcf21O35437 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tcf21O35437 Gm27325-201ENSMUST00000175467 74 ntBASIC21.51■■□□□ 1.03
Tcf21O35437 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tcf21O35437 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tcf21O35437 Zxda-201ENSMUST00000117281 2621 ntBASIC21.45■■□□□ 1.02
Tcf21O35437 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.44■■□□□ 1.02
Tcf21O35437 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.43■■□□□ 1.02
Tcf21O35437 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tcf21O35437 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tcf21O35437 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tcf21O35437 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tcf21O35437 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tcf21O35437 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.3■■□□□ 1
Tcf21O35437 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tcf21O35437 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tcf21O35437 Rab21-202ENSMUST00000218831 843 ntBASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms