Protein–RNA interactions for Protein: Q9R171

Cbln1, Cerebellin-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbln1Q9R171 Gm25239-201ENSMUST00000174915 86 ntBASIC28,3■■■□□ 2,12
Cbln1Q9R171 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26,37■■□□□ 1,81
Cbln1Q9R171 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Cbln1Q9R171 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25,76■■□□□ 1,71
Cbln1Q9R171 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,48■■□□□ 1,67
Cbln1Q9R171 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25,34■■□□□ 1,65
Cbln1Q9R171 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Cbln1Q9R171 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Cbln1Q9R171 Gm15042-201ENSMUST00000120212 883 ntBASIC24,99■■□□□ 1,59
Cbln1Q9R171 Psd-208ENSMUST00000224556 2034 ntBASIC24,93■■□□□ 1,58
Cbln1Q9R171 Gm15045-201ENSMUST00000117359 883 ntBASIC24,45■■□□□ 1,5
Cbln1Q9R171 Gm24109-201ENSMUST00000175489 103 ntBASIC24,38■■□□□ 1,49
Cbln1Q9R171 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Cbln1Q9R171 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24,02■■□□□ 1,44
Cbln1Q9R171 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23,88■■□□□ 1,41
Cbln1Q9R171 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,78■■□□□ 1,4
Cbln1Q9R171 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23,74■■□□□ 1,39
Cbln1Q9R171 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
Cbln1Q9R171 Gm23366-201ENSMUST00000175022 89 ntBASIC23,7■■□□□ 1,38
Cbln1Q9R171 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23,68■■□□□ 1,38
Cbln1Q9R171 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,67■■□□□ 1,38
Cbln1Q9R171 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23,62■■□□□ 1,37
Cbln1Q9R171 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23,56■■□□□ 1,36
Cbln1Q9R171 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Cbln1Q9R171 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23,54■■□□□ 1,36
Cbln1Q9R171 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,51■■□□□ 1,35
Cbln1Q9R171 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,47■■□□□ 1,35
Cbln1Q9R171 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,38■■□□□ 1,33
Cbln1Q9R171 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23,34■■□□□ 1,33
Cbln1Q9R171 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23,31■■□□□ 1,32
Cbln1Q9R171 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
Cbln1Q9R171 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Cbln1Q9R171 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,19■■□□□ 1,3
Cbln1Q9R171 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,17■■□□□ 1,3
Cbln1Q9R171 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23,12■■□□□ 1,29
Cbln1Q9R171 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,11■■□□□ 1,29
Cbln1Q9R171 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,08■■□□□ 1,29
Cbln1Q9R171 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23,07■■□□□ 1,28
Cbln1Q9R171 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,04■■□□□ 1,28
Cbln1Q9R171 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22,96■■□□□ 1,27
Cbln1Q9R171 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,87■■□□□ 1,25
Cbln1Q9R171 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,84■■□□□ 1,25
Cbln1Q9R171 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,8■■□□□ 1,24
Cbln1Q9R171 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,76■■□□□ 1,23
Cbln1Q9R171 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,74■■□□□ 1,23
Cbln1Q9R171 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,71■■□□□ 1,23
Cbln1Q9R171 Gm42596-201ENSMUST00000196305 1958 ntBASIC22,7■■□□□ 1,22
Cbln1Q9R171 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,64■■□□□ 1,21
Cbln1Q9R171 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22,59■■□□□ 1,21
Cbln1Q9R171 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22,55■■□□□ 1,2
Cbln1Q9R171 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Cbln1Q9R171 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22,53■■□□□ 1,2
Cbln1Q9R171 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,51■■□□□ 1,19
Cbln1Q9R171 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Cbln1Q9R171 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,39■■□□□ 1,18
Cbln1Q9R171 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22,39■■□□□ 1,17
Cbln1Q9R171 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Cbln1Q9R171 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Cbln1Q9R171 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22,32■■□□□ 1,16
Cbln1Q9R171 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22,26■■□□□ 1,15
Cbln1Q9R171 Gm25238-201ENSMUST00000174914 89 ntBASIC22,24■■□□□ 1,15
Cbln1Q9R171 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22,22■■□□□ 1,15
Cbln1Q9R171 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,2■■□□□ 1,14
Cbln1Q9R171 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22,14■■□□□ 1,13
Cbln1Q9R171 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22,13■■□□□ 1,13
Cbln1Q9R171 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,12■■□□□ 1,13
Cbln1Q9R171 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,13
Cbln1Q9R171 Gm10524-201ENSMUST00000181931 1893 ntBASIC22,07■■□□□ 1,12
Cbln1Q9R171 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Cbln1Q9R171 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22,04■■□□□ 1,12
Cbln1Q9R171 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
Cbln1Q9R171 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,97■■□□□ 1,11
Cbln1Q9R171 Gm27325-201ENSMUST00000175467 74 ntBASIC21,94■■□□□ 1,1
Cbln1Q9R171 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,93■■□□□ 1,1
Cbln1Q9R171 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21,93■■□□□ 1,1
Cbln1Q9R171 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21,91■■□□□ 1,1
Cbln1Q9R171 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,09
Cbln1Q9R171 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21,86■■□□□ 1,09
Cbln1Q9R171 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Cbln1Q9R171 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,08
Cbln1Q9R171 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21,82■■□□□ 1,08
Cbln1Q9R171 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,77■■□□□ 1,08
Cbln1Q9R171 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,77■■□□□ 1,08
Cbln1Q9R171 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,76■■□□□ 1,07
Cbln1Q9R171 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,72■■□□□ 1,07
Cbln1Q9R171 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,68■■□□□ 1,06
Cbln1Q9R171 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21,68■■□□□ 1,06
Cbln1Q9R171 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Cbln1Q9R171 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,66■■□□□ 1,06
Cbln1Q9R171 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21,65■■□□□ 1,06
Cbln1Q9R171 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,65■■□□□ 1,06
Cbln1Q9R171 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21,65■■□□□ 1,06
Cbln1Q9R171 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,06
Cbln1Q9R171 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,64■■□□□ 1,05
Cbln1Q9R171 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21,64■■□□□ 1,05
Cbln1Q9R171 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21,62■■□□□ 1,05
Cbln1Q9R171 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,61■■□□□ 1,05
Cbln1Q9R171 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Cbln1Q9R171 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,59■■□□□ 1,05
Cbln1Q9R171 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms