RNA–Protein interactions for RNA: YDR539W

FDC1, Transcript of Putative phenylacrylic acid decarboxylase, yeast

Gene FDC1, Length 1,512 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDC1	YDR539W	IRC10	Q08118	586 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	SWI6	P09959	803 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	APL2	P36000	726 aa	Predicted RBP	4.92	□□□□□ -1.62
FDC1	YDR539W	BAP3	P41815	604 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	UBC11	P52492	156 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	MTL1	P53214	551 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	ARG5,6	Q01217	863 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	SLM3	Q12093	417 aa		4.92	□□□□□ -1.62
FDC1	YDR539W	CTT1	P06115	562 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	DAL5	P15365	543 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	BRF1	P29056	596 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	CCT3	P39077	534 aa	Known RBP	4.91	□□□□□ -1.62
FDC1	YDR539W	DOT6	P40059	670 aa	Known RBP	4.91	□□□□□ -1.62
FDC1	YDR539W	QRI1	P43123	477 aa	Known RBP	4.91	□□□□□ -1.62
FDC1	YDR539W	TEL2	P53038	688 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	PCL10	P53124	433 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	COG4	Q06096	861 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	MCM21	Q06675	368 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	SGO1	Q08490	590 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	CFT2	Q12102	859 aa	Predicted RBP	4.91	□□□□□ -1.62
FDC1	YDR539W	LYS2	P07702	1392 aa		4.91	□□□□□ -1.62
FDC1	YDR539W	HMG1	P12683	1054 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	PCL2	P25693	308 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	EFB1	P32471	206 aa	Known RBP	4.9	□□□□□ -1.63
FDC1	YDR539W	HIR1	P32479	840 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
FDC1	YDR539W	YKR018C	P36114	725 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	APT2	P36973	181 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	FMO1	P38866	432 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	LYS9	P38999	446 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	CTK3	P46963	296 aa	Predicted RBP	4.9	□□□□□ -1.63
FDC1	YDR539W	AIM14	P53109	570 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	ARP4	P80428	489 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	MRH1	Q12117	320 aa	Predicted RBP	4.9	□□□□□ -1.63
FDC1	YDR539W	NKP1	Q12493	238 aa		4.9	□□□□□ -1.63
FDC1	YDR539W	THR4	P16120	514 aa	Known RBP	4.89	□□□□□ -1.63
FDC1	YDR539W	PPG1	P32838	368 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	YRB1	P41920	201 aa	Known RBP	4.89	□□□□□ -1.63
FDC1	YDR539W	ALG12	P53730	551 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	HOT1	Q03213	719 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	GIS1	Q03833	894 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	CTK1	Q03957	528 aa	Known RBP	4.89	□□□□□ -1.63
FDC1	YDR539W	VPS20	Q04272	221 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	VMS1	Q04311	632 aa	Known RBP	4.89	□□□□□ -1.63
FDC1	YDR539W	HRP1	Q99383	534 aa	Known RBP	4.89	□□□□□ -1.63
FDC1	YDR539W	RIM15	P43565	1770 aa		4.89	□□□□□ -1.63
FDC1	YDR539W	MLP1	Q02455	1875 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	CDC37	P06101	506 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	BIK1	P11709	440 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	ERG6	P25087	383 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	MVD1	P32377	396 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	DID4	P36108	232 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	TRZ1	P36159	838 aa	Predicted RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	PIM1	P36775	1133 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	CBR1	P38626	284 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	PET100	P38958	111 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	SHE4	P51534	789 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	YGL081W	P53156	320 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	RNH70	P53331	553 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	IST1	P53843	298 aa	Predicted RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	RGC1	Q06108	1083 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	ATG33	Q06485	197 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	ATG9	Q12142	997 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	VPS5	Q92331	675 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	APC1	P53886	1748 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	SIR4	P11978	1358 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	ADE6	P38972	1358 aa	Known RBP	4.88	□□□□□ -1.63
FDC1	YDR539W	RTC1	Q08281	1341 aa		4.88	□□□□□ -1.63
FDC1	YDR539W	SES1	P07284	462 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	SFL1	P20134	766 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	TIF3	P34167	436 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	HEL1	P36113	551 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	PCM1	P38628	557 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	NPR3	P38742	1146 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	REV7	P38927	245 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	BEM4	P39011	633 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	YJR142W	P47173	342 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	PAN2	P53010	1115 aa	Predicted RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	SSL2	Q00578	843 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	TFB2	Q02939	513 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	RCF1	Q03713	159 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	RRB1	Q04225	511 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	CMS1	Q07897	291 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	ABP140	Q08641	628 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	SMC6	Q12749	1114 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	SAC3	P46674	1301 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	CDC10	P25342	322 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	YEL1	P34225	687 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	RRP1	P35178	278 aa	Predicted RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	SFB3	P38810	929 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
FDC1	YDR539W	NUP60	P39705	539 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	LEE1	Q02799	301 aa	Known RBP	4.87	□□□□□ -1.63
FDC1	YDR539W	PSR1	Q07800	427 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	YLR001C	Q07895	862 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	CIR2	Q08822	631 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	YKL033W-A	Q86ZR7	236 aa		4.87	□□□□□ -1.63
FDC1	YDR539W	SIR3	P06701	978 aa		4.86	□□□□□ -1.63
FDC1	YDR539W	RNR2	P09938	399 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms