Protein–RNA interactions for Protein: Q02939

TFB2, General transcription and DNA repair factor IIH subunit TFB2, yeastyeast

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB2Q02939 YML009W-BYML009W-B 477 nt20.48■□□□□ 0.87
TFB2Q02939 NSR1YGR159C 1245 nt20.39■□□□□ 0.85
TFB2Q02939 NOP1YDL014W 984 nt19.84■□□□□ 0.77
TFB2Q02939 YKL036CYKL036C 393 nt18.23■□□□□ 0.51
TFB2Q02939 MDJ1YFL016C 1536 nt18.23■□□□□ 0.51
TFB2Q02939 SRX1YKL086W 384 nt17.33■□□□□ 0.36
TFB2Q02939 Q0297Q0297 156 nt17.31■□□□□ 0.36
TFB2Q02939 YJL027CYJL027C 417 nt17.01■□□□□ 0.31
TFB2Q02939 SCS3YGL126W 1143 nt16.53■□□□□ 0.24
TFB2Q02939 YCR051WYCR051W 669 nt16.48■□□□□ 0.23
TFB2Q02939 DBP2YNL112W 1641 nt16.06■□□□□ 0.16
TFB2Q02939 YOL085CYOL085C 342 nt15.79■□□□□ 0.12
TFB2Q02939 TRN1tP(UGG)A 72 nt15.71■□□□□ 0.11
TFB2Q02939 SUF9tP(UGG)F 72 nt15.71■□□□□ 0.11
TFB2Q02939 SUF8tP(UGG)H 72 nt15.71■□□□□ 0.11
TFB2Q02939 tP(UGG)LtP(UGG)L 72 nt15.71■□□□□ 0.11
TFB2Q02939 SUF7tP(UGG)M 72 nt15.71■□□□□ 0.11
TFB2Q02939 tP(UGG)N1tP(UGG)N1 72 nt15.71■□□□□ 0.11
TFB2Q02939 tP(UGG)N2tP(UGG)N2 72 nt15.71■□□□□ 0.11
TFB2Q02939 tP(UGG)O1tP(UGG)O1 72 nt15.71■□□□□ 0.11
TFB2Q02939 SUF11tP(UGG)O2 72 nt15.71■□□□□ 0.11
TFB2Q02939 YBR190WYBR190W 312 nt15.66■□□□□ 0.1
TFB2Q02939 SSA3YBL075C 1950 nt15.66■□□□□ 0.1
TFB2Q02939 CCC1YLR220W 969 nt15.63■□□□□ 0.09
TFB2Q02939 PKP1YIL042C 1185 nt15.61■□□□□ 0.09
TFB2Q02939 RPP1BYDL130W 321 nt15.56■□□□□ 0.08
TFB2Q02939 RTC3YHR087W 336 nt15.26■□□□□ 0.03
TFB2Q02939 RVS167YDR388W 1449 nt15.09■□□□□ 0.01
TFB2Q02939 SCJ1YMR214W 1134 nt14.99□□□□□ -0.01
TFB2Q02939 PET122YER153C 765 nt14.89□□□□□ -0.03
TFB2Q02939 tP(UGG)O3tP(UGG)O3 72 nt14.86□□□□□ -0.03
TFB2Q02939 PUT4YOR348C 1884 nt14.82□□□□□ -0.04
TFB2Q02939 ATS1YAL020C 1002 nt14.76□□□□□ -0.05
TFB2Q02939 SCR1SCR1 522 nt14.7□□□□□ -0.06
TFB2Q02939 SHR5YOL110W 714 nt14.53□□□□□ -0.08
TFB2Q02939 RRN5YLR141W 1092 nt14.46□□□□□ -0.09
TFB2Q02939 Q0182Q0182 405 nt14.41□□□□□ -0.1
TFB2Q02939 YDJ1YNL064C 1230 nt14.35□□□□□ -0.11
TFB2Q02939 ARE1YCR048W 1833 nt14.34□□□□□ -0.11
TFB2Q02939 POA1YBR022W 534 nt14.3□□□□□ -0.12
TFB2Q02939 DEP1YAL013W 1218 nt14.22□□□□□ -0.13
TFB2Q02939 URN1YPR152C 1398 nt14.22□□□□□ -0.13
TFB2Q02939 YER088W-BYER088W-B 147 nt14.16□□□□□ -0.14
TFB2Q02939 RSB1YOR049C 1065 nt14.15□□□□□ -0.14
TFB2Q02939 YHR049C-AYHR049C-A 297 nt14.12□□□□□ -0.15
TFB2Q02939 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
TFB2Q02939 SAH1YER043C 1350 nt14.11□□□□□ -0.15
TFB2Q02939 GAR1YHR089C 618 nt14.09□□□□□ -0.15
TFB2Q02939 SPT5YML010W 3192 nt14.08□□□□□ -0.16
TFB2Q02939 OPI9YLR338W 858 nt14□□□□□ -0.17
TFB2Q02939 RPN10YHR200W 807 nt13.96□□□□□ -0.17
TFB2Q02939 MOT3YMR070W 1473 nt13.94□□□□□ -0.18
TFB2Q02939 YNL208WYNL208W 600 nt13.94□□□□□ -0.18
TFB2Q02939 SSA4YER103W 1929 nt13.9□□□□□ -0.18
TFB2Q02939 BUD23YCR047C 828 nt13.73□□□□□ -0.21
TFB2Q02939 PST2YDR032C 597 nt13.68□□□□□ -0.22
TFB2Q02939 TIR1YER011W 765 nt13.61□□□□□ -0.23
TFB2Q02939 PUN1YLR414C 792 nt13.59□□□□□ -0.23
TFB2Q02939 YJR018WYJR018W 363 nt13.55□□□□□ -0.24
TFB2Q02939 PTC2YER089C 1395 nt13.54□□□□□ -0.24
TFB2Q02939 SSA1YAL005C 1929 nt13.46□□□□□ -0.25
TFB2Q02939 BDF1YLR399C 2061 nt13.46□□□□□ -0.26
TFB2Q02939 NAB2YGL122C 1578 nt13.44□□□□□ -0.26
TFB2Q02939 MEP2YNL142W 1500 nt13.33□□□□□ -0.28
TFB2Q02939 YJR120WYJR120W 351 nt13.3□□□□□ -0.28
TFB2Q02939 RPP2BYDR382W 333 nt13.25□□□□□ -0.29
TFB2Q02939 TAT1YBR069C 1860 nt13.24□□□□□ -0.29
TFB2Q02939 SRB2YHR041C 633 nt13.22□□□□□ -0.29
TFB2Q02939 FIS1YIL065C 468 nt13.21□□□□□ -0.29
TFB2Q02939 SHU1YHL006C 453 nt13.16□□□□□ -0.3
TFB2Q02939 DCW1YKL046C 1350 nt13.14□□□□□ -0.31
TFB2Q02939 DAL1YIR027C 1383 nt13.12□□□□□ -0.31
TFB2Q02939 FPR4YLR449W 1179 nt13.12□□□□□ -0.31
TFB2Q02939 YKL097CYKL097C 411 nt13.1□□□□□ -0.31
TFB2Q02939 INM2YDR287W 879 nt13.06□□□□□ -0.32
TFB2Q02939 YAL037C-BYAL037C-B 975 nt13.04□□□□□ -0.32
TFB2Q02939 YPS1YLR120C 1710 nt13.03□□□□□ -0.32
TFB2Q02939 PHO4YFR034C 939 nt13.02□□□□□ -0.33
TFB2Q02939 WWM1YFL010C 636 nt13.01□□□□□ -0.33
TFB2Q02939 BDH2YAL061W 1254 nt12.95□□□□□ -0.34
TFB2Q02939 YBR220CYBR220C 1683 nt12.95□□□□□ -0.34
TFB2Q02939 YBL100CYBL100C 315 nt12.94□□□□□ -0.34
TFB2Q02939 PAC11YDR488C 1602 nt12.92□□□□□ -0.34
TFB2Q02939 YHR165W-AYHR165W-A 312 nt12.91□□□□□ -0.34
TFB2Q02939 EMI2YDR516C 1503 nt12.91□□□□□ -0.34
TFB2Q02939 YGR021WYGR021W 873 nt12.87□□□□□ -0.35
TFB2Q02939 YDR095CYDR095C 411 nt12.82□□□□□ -0.36
TFB2Q02939 HOM6YJR139C 1080 nt12.82□□□□□ -0.36
TFB2Q02939 YMR090WYMR090W 684 nt12.81□□□□□ -0.36
TFB2Q02939 FUN26YAL022C 1554 nt12.78□□□□□ -0.36
TFB2Q02939 MNP1YGL068W 585 nt12.78□□□□□ -0.36
TFB2Q02939 YFL021C-AYFL021C-A 855 nt12.76□□□□□ -0.37
TFB2Q02939 YDL221WYDL221W 552 nt12.75□□□□□ -0.37
TFB2Q02939 LSM3YLR438C-A 270 nt12.75□□□□□ -0.37
TFB2Q02939 TRM9YML014W 840 nt12.75□□□□□ -0.37
TFB2Q02939 SDH1YKL148C 1923 nt12.74□□□□□ -0.37
TFB2Q02939 CAC2YML102W 1407 nt12.71□□□□□ -0.37
TFB2Q02939 PTP1YDL230W 1008 nt12.67□□□□□ -0.38
TFB2Q02939 RKM5YLR137W 1104 nt12.63□□□□□ -0.39
TFB2Q02939 ALF1YNL148C 765 nt12.63□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 10.4 ms