RNA–Protein interactions for RNA: YOR055W

YOR055W, Transcript of Dubious open reading frame, yeast

Gene YOR055W, Length 435 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOR055W	YOR055W	FLC2	P39719	783 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	OAF1	P39720	1047 aa	Predicted RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	KHA1	P40309	873 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	DSN1	P40568	576 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	ALA1	P40825	983 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	TFG1	P41895	735 aa	Predicted RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	PSP2	P50109	593 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	YML6	P51998	286 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	YGL036W	P53185	909 aa	Predicted RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	MDR1	P53258	950 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	COG6	P53959	839 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	YNL040W	P53960	456 aa	Predicted RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	SUB1	P54000	292 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	UBX4	P54730	416 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	SHR3	Q02774	210 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	JIP4	Q03361	876 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	YMR027W	Q04371	470 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	ERV41	Q04651	352 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	THI7	Q05998	598 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	KAP95	Q06142	861 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	TDA5	Q06417	326 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	CDD1	Q06549	142 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	CMS1	Q07897	291 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	NOB1	Q08444	459 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	TAF10	Q12030	206 aa		2.6	□□□□□ -1.99
YOR055W	YOR055W	SGT2	Q12118	346 aa	Known RBP	2.6	□□□□□ -1.99
YOR055W	YOR055W	JIP3	O13555	125 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	GAL10	P04397	699 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	CHS1	P08004	1131 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	HVG1	P0CE11	249 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	MAS2	P11914	482 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PDR1	P12383	1068 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	POX1	P13711	748 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PMS1	P14242	873 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PUT4	P15380	627 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	GAL11	P19659	1081 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	YCR015C	P25616	317 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	CDC20	P26309	610 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	MEI4	P29467	408 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	MCM5	P29496	775 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	MLS1	P30952	554 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PSE1	P32337	1089 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	HXT3	P32466	567 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	BCS1	P32839	456 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SMY2	P32909	740 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	TRM2	P33753	639 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	HEL1	P36113	551 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	RPC37	P36121	282 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SET3	P36124	751 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
YOR055W	YOR055W	SWC5	P38326	303 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PCA1	P38360	1216 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	GUA1	P38625	525 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	PCM1	P38628	557 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	MSR1	P38714	643 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SMF2	P38778	549 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SPC97	P38863	823 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	RGA1	P39083	1007 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	ARG2	P40360	574 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	PFK26	P40433	827 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	TMA108	P40462	946 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	YIL054W	P40524	105 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SNZ3	P43545	298 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	JJJ3	P47138	172 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	ALT1	P52893	592 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	MND1	P53102	219 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SNZ2	P53824	298 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	NMA111	P53920	997 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	CDC55	Q00362	526 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	YPL109C	Q02981	657 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	VPS16	Q03308	798 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	SNU56	Q03782	492 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	SXM1	Q04175	944 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	BUD22	Q04347	519 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	YLR177W	Q06251	628 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	MAG2	Q06436	670 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	ALR1	Q08269	859 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	OSW1	Q08692	278 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	TRE1	Q08919	783 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	TYW1	Q08960	810 aa	Known RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	FAP7	Q12055	197 aa	Predicted RBP	2.59	□□□□□ -1.99
YOR055W	YOR055W	VPS54	Q12071	889 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	YPR027C	Q12079	277 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	YRR1	Q12172	810 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	EMP46	Q12396	444 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	AVL9	Q12500	764 aa		2.59	□□□□□ -1.99
YOR055W	YOR055W	UBR1	P19812	1950 aa		2.59	□□□□□ -2
YOR055W	YOR055W	TEF1	P02994	458 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	ADE4	P04046	510 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	ILS1	P09436	1072 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	WHI2	P12611	486 aa		2.58	□□□□□ -2
YOR055W	YOR055W	GLN3	P18494	730 aa		2.58	□□□□□ -2
YOR055W	YOR055W	PRP4	P20053	465 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	CHL1	P22516	861 aa	Predicted RBP	2.58	□□□□□ -2
YOR055W	YOR055W	MRPL25	P23369	157 aa		2.58	□□□□□ -2
YOR055W	YOR055W	DBP1	P24784	617 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	VBA3	P25594	458 aa		2.58	□□□□□ -2
YOR055W	YOR055W	KIP2	P28743	706 aa		2.58	□□□□□ -2
YOR055W	YOR055W	SEC1	P30619	724 aa	Known RBP	2.58	□□□□□ -2
YOR055W	YOR055W	MVD1	P32377	396 aa	Known RBP	2.58	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms