RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C UBP13P38187 747 aa2.41□□□□□ -2.02
SSD1YDR293C TIF5P38431 405 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C REV7P38927 245 aa2.41□□□□□ -2.02
SSD1YDR293C SHC1P39000 512 aa2.41□□□□□ -2.02
SSD1YDR293C YGL082WP53155 381 aa2.41□□□□□ -2.02
SSD1YDR293C MDR1P53258 950 aa2.41□□□□□ -2.02
SSD1YDR293C MDM1Q01846 1127 aa2.41□□□□□ -2.02
SSD1YDR293C GIR2Q03768 265 aaPredicted RBP2.41□□□□□ -2.02
SSD1YDR293C ATG16Q03818 150 aa2.41□□□□□ -2.02
SSD1YDR293C THI73Q07904 523 aa2.41□□□□□ -2.02
SSD1YDR293C FMP25Q08023 583 aa2.41□□□□□ -2.02
SSD1YDR293C PPM2Q08282 695 aa2.41□□□□□ -2.02
SSD1YDR293C THS1P04801 734 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C COQ1P18900 473 aa2.41□□□□□ -2.02
SSD1YDR293C UBC1P21734 215 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C PRE8P23639 250 aa2.41□□□□□ -2.02
SSD1YDR293C MSH2P25847 964 aa2.41□□□□□ -2.02
SSD1YDR293C KTR3P38130 404 aaPredicted RBP2.41□□□□□ -2.02
SSD1YDR293C AKR1P39010 764 aa2.41□□□□□ -2.02
SSD1YDR293C CTH1P47976 325 aa2.41□□□□□ -2.02
SSD1YDR293C LSC1P53598 329 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C YNL034WP53963 612 aa2.41□□□□□ -2.02
SSD1YDR293C YNL018CP53976 612 aa2.41□□□□□ -2.02
SSD1YDR293C ERG5P54781 538 aa2.41□□□□□ -2.02
SSD1YDR293C TIM50Q02776 476 aa2.41□□□□□ -2.02
SSD1YDR293C DON1Q05610 365 aa2.41□□□□□ -2.02
SSD1YDR293C PHM6Q05637 104 aa2.41□□□□□ -2.02
SSD1YDR293C APL5Q08951 932 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C HFI1Q12060 488 aa2.41□□□□□ -2.02
SSD1YDR293C YMR085WP0CF18 432 aa2.41□□□□□ -2.02
SSD1YDR293C YRO2P38079 344 aa2.41□□□□□ -2.02
SSD1YDR293C STT3P39007 718 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C AIM14P53109 570 aa2.41□□□□□ -2.02
SSD1YDR293C VTI1Q04338 217 aa2.41□□□□□ -2.02
SSD1YDR293C FAS2P19097 1887 aaKnown RBP2.41□□□□□ -2.02
SSD1YDR293C ARG82P07250 355 aa2.4□□□□□ -2.02
SSD1YDR293C NUC1P08466 329 aa2.4□□□□□ -2.02
SSD1YDR293C ADH4P10127 382 aa2.4□□□□□ -2.02
SSD1YDR293C PMS1P14242 873 aa2.4□□□□□ -2.02
SSD1YDR293C MEF1P25039 761 aa2.4□□□□□ -2.02
SSD1YDR293C MRE11P32829 692 aa2.4□□□□□ -2.02
SSD1YDR293C DUR3P33413 735 aa2.4□□□□□ -2.02
SSD1YDR293C KTR2P33550 425 aa2.4□□□□□ -2.02
SSD1YDR293C PEX6P33760 1030 aa2.4□□□□□ -2.02
SSD1YDR293C SET3P36124 751 aa2.4□□□□□ -2.02
SSD1YDR293C BET3P36149 193 aa2.4□□□□□ -2.02
SSD1YDR293C VRP1P37370 817 aa2.4□□□□□ -2.02
SSD1YDR293C YSW1P38280 609 aa2.4□□□□□ -2.02
SSD1YDR293C RTT107P38850 1070 aa2.4□□□□□ -2.02
SSD1YDR293C SPT8P38915 602 aa2.4□□□□□ -2.02
SSD1YDR293C NOC2P39744 710 aaKnown RBP2.4□□□□□ -2.02
SSD1YDR293C VAB2P40003 282 aa2.4□□□□□ -2.02
SSD1YDR293C ZDS2P54786 942 aa2.4□□□□□ -2.02
SSD1YDR293C SXM1Q04175 944 aaKnown RBP2.4□□□□□ -2.02
SSD1YDR293C YMR018WQ04364 514 aa2.4□□□□□ -2.02
SSD1YDR293C INM2Q05533 292 aa2.4□□□□□ -2.02
SSD1YDR293C VHS3Q08438 674 aa2.4□□□□□ -2.02
SSD1YDR293C TCO89Q08921 799 aa2.4□□□□□ -2.02
SSD1YDR293C RTT10Q08924 1013 aa2.4□□□□□ -2.02
SSD1YDR293C YIG1Q08956 461 aa2.4□□□□□ -2.02
SSD1YDR293C TRP2P00899 507 aaKnown RBP2.4□□□□□ -2.03
SSD1YDR293C NAT1P12945 854 aaKnown RBP2.4□□□□□ -2.03
SSD1YDR293C RAD5P32849 1169 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C MDL2P33311 773 aa2.4□□□□□ -2.03
SSD1YDR293C LOS1P33418 1100 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C PTK1P36002 662 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C SPP381P38282 291 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C YBR238CP38330 731 aaKnown RBP2.4□□□□□ -2.03
SSD1YDR293C MMS21P38632 267 aa2.4□□□□□ -2.03
SSD1YDR293C VFA1P40080 203 aa2.4□□□□□ -2.03
SSD1YDR293C JJJ3P47138 172 aa2.4□□□□□ -2.03
SSD1YDR293C CLA4P48562 842 aa2.4□□□□□ -2.03
SSD1YDR293C PEX8P53248 589 aa2.4□□□□□ -2.03
SSD1YDR293C YGR130CP53278 816 aa2.4□□□□□ -2.03
SSD1YDR293C MTG1Q03151 367 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C YLR297WQ05899 129 aa2.4□□□□□ -2.03
SSD1YDR293C TMA7Q3E764 64 aaKnown RBP2.4□□□□□ -2.03
SSD1YDR293C SNF3P10870 884 aa2.4□□□□□ -2.03
SSD1YDR293C MSH3P25336 1018 aa2.4□□□□□ -2.03
SSD1YDR293C NFS1P25374 497 aa2.4□□□□□ -2.03
SSD1YDR293C URA1P28272 314 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C NIP1P32497 812 aaKnown RBP2.4□□□□□ -2.03
SSD1YDR293C RCK2P38623 610 aa2.4□□□□□ -2.03
SSD1YDR293C PCI8P40512 444 aa2.4□□□□□ -2.03
SSD1YDR293C YJL049WP47048 450 aa2.4□□□□□ -2.03
SSD1YDR293C PCL10P53124 433 aa2.4□□□□□ -2.03
SSD1YDR293C DSE4P53753 1117 aa2.4□□□□□ -2.03
SSD1YDR293C SDH5Q08230 162 aa2.4□□□□□ -2.03
SSD1YDR293C KEL3Q08979 651 aaPredicted RBP2.4□□□□□ -2.03
SSD1YDR293C MCD1Q12158 566 aa2.4□□□□□ -2.03
SSD1YDR293C PGK1P00560 416 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C MTF2P10849 440 aa2.39□□□□□ -2.03
SSD1YDR293C CLN3P13365 580 aa2.39□□□□□ -2.03
SSD1YDR293C KAR3P17119 729 aa2.39□□□□□ -2.03
SSD1YDR293C MSM1P22438 575 aa2.39□□□□□ -2.03
SSD1YDR293C MRS6P32864 603 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C KTR4P38131 464 aa2.39□□□□□ -2.03
SSD1YDR293C YHR020WP38708 688 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C YMR124WP39523 943 aaKnown RBP2.39□□□□□ -2.03
SSD1YDR293C SIP5P40210 489 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms