RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C DRS1P32892 752 aaKnown RBP5.12□□□□□ -1.59
SSD1YDR293C BFR2Q06631 534 aaKnown RBP4.64□□□□□ -1.67
SSD1YDR293C MON2P48563 1636 aaPredicted RBP4.56□□□□□ -1.68
SSD1YDR293C MTC1P47018 478 aaKnown RBP4.41□□□□□ -1.7
SSD1YDR293C TFA1P36100 482 aa4.35□□□□□ -1.71
SSD1YDR293C RQC2Q12532 1038 aaKnown RBP4.2□□□□□ -1.74
SSD1YDR293C TY1B-DR4Q07793 1604 aa4.19□□□□□ -1.74
SSD1YDR293C DIP2Q12220 943 aaPredicted RBP4.11□□□□□ -1.75
SSD1YDR293C DMA1P38823 416 aa4.06□□□□□ -1.76
SSD1YDR293C KOG1P38873 1557 aa4.03□□□□□ -1.76
SSD1YDR293C FAP1P53971 965 aa4.02□□□□□ -1.77
SSD1YDR293C INO80P53115 1489 aa4□□□□□ -1.77
SSD1YDR293C PTP3P40048 928 aa3.98□□□□□ -1.77
SSD1YDR293C TCB3Q03640 1545 aaKnown RBP3.98□□□□□ -1.77
SSD1YDR293C AVT3P36062 692 aa3.96□□□□□ -1.78
SSD1YDR293C SWR1Q05471 1514 aa3.95□□□□□ -1.78
SSD1YDR293C SSK2P53599 1579 aa3.95□□□□□ -1.78
SSD1YDR293C THO2P53552 1597 aaKnown RBP3.93□□□□□ -1.78
SSD1YDR293C TAF7Q05021 590 aa3.9□□□□□ -1.78
SSD1YDR293C PEP1P32319 1579 aa3.81□□□□□ -1.8
SSD1YDR293C PRY3P47033 881 aa3.8□□□□□ -1.8
SSD1YDR293C YAH1Q12184 172 aaKnown RBP3.74□□□□□ -1.81
SSD1YDR293C DNA2P38859 1522 aa3.72□□□□□ -1.81
SSD1YDR293C SIN3P22579 1536 aa3.71□□□□□ -1.82
SSD1YDR293C RSE1Q04693 1361 aaKnown RBP3.71□□□□□ -1.82
SSD1YDR293C SGS1P35187 1447 aa3.7□□□□□ -1.82
SSD1YDR293C RPL17AP05740 184 aaKnown RBP3.69□□□□□ -1.82
SSD1YDR293C RPL17BP46990 184 aaKnown RBP3.69□□□□□ -1.82
SSD1YDR293C SPA2P23201 1466 aaKnown RBP3.69□□□□□ -1.82
SSD1YDR293C MYO2P19524 1574 aaKnown RBP3.69□□□□□ -1.82
SSD1YDR293C IRC20Q06554 1556 aa3.66□□□□□ -1.82
SSD1YDR293C HAP1P0CE41 1502 aa3.62□□□□□ -1.83
SSD1YDR293C REB1P21538 810 aa3.61□□□□□ -1.83
SSD1YDR293C DMA2P53924 522 aa3.61□□□□□ -1.83
SSD1YDR293C SPT6P23615 1451 aaKnown RBP3.61□□□□□ -1.83
SSD1YDR293C REV3P14284 1504 aa3.59□□□□□ -1.83
SSD1YDR293C RPG1P38249 964 aaKnown RBP3.58□□□□□ -1.84
SSD1YDR293C DNF1P32660 1571 aa3.57□□□□□ -1.84
SSD1YDR293C HSL1P34244 1518 aa3.56□□□□□ -1.84
SSD1YDR293C ATG2P53855 1592 aa3.56□□□□□ -1.84
SSD1YDR293C SSN2P38931 1420 aa3.55□□□□□ -1.84
SSD1YDR293C ESC1Q03661 1658 aaKnown RBP3.54□□□□□ -1.84
SSD1YDR293C SSP1P38871 571 aa3.53□□□□□ -1.84
SSD1YDR293C LEO1P38439 464 aa3.52□□□□□ -1.85
SSD1YDR293C ISW2Q08773 1120 aa3.51□□□□□ -1.85
SSD1YDR293C MDS3P53094 1487 aa3.5□□□□□ -1.85
SSD1YDR293C MET5P47169 1442 aa3.49□□□□□ -1.85
SSD1YDR293C TY1B-BRQ12193 1756 aa3.49□□□□□ -1.85
SSD1YDR293C TY1B-GR3Q12316 1755 aa3.49□□□□□ -1.85
SSD1YDR293C TY1B-ORQ92393 1755 aa3.49□□□□□ -1.85
SSD1YDR293C ESP1Q03018 1630 aa3.49□□□□□ -1.85
SSD1YDR293C YIL055CP40523 627 aaKnown RBP3.49□□□□□ -1.85
SSD1YDR293C SPB4P25808 606 aaPredicted RBP3.48□□□□□ -1.85
SSD1YDR293C HIR3P47171 1648 aa3.45□□□□□ -1.86
SSD1YDR293C BNI1P41832 1953 aa3.45□□□□□ -1.86
SSD1YDR293C SKI3P17883 1432 aaKnown RBP3.44□□□□□ -1.86
SSD1YDR293C XRN1P22147 1528 aaKnown RBP3.43□□□□□ -1.86
SSD1YDR293C RPA190P10964 1664 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C ARP8Q12386 881 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SSD1YDR293C TY1B-HO13535 1793 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-DR5P0C2I2 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-DR6P0C2I3 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-LR2P0C2I5 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-LR3P0C2I6 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C TY1B-PR1P0C2I9 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C TY1B-PR2P0C2J0 1756 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-PR3P0C2J1 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C TY1B-JR1P47098 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-ML2Q03434 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C TY1B-ER1Q03612 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-ML1Q04711 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C TY1B-GR2Q12269 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-OLQ12273 1755 aa3.42□□□□□ -1.86
SSD1YDR293C TY1B-PLQ12414 1755 aaKnown RBP3.42□□□□□ -1.86
SSD1YDR293C YCK3P39962 524 aa3.42□□□□□ -1.86
SSD1YDR293C BUD4P47136 1447 aa3.41□□□□□ -1.86
SSD1YDR293C DCD1P06773 312 aa3.41□□□□□ -1.86
SSD1YDR293C TSR3Q12094 313 aaKnown RBP3.4□□□□□ -1.86
SSD1YDR293C LTE1P07866 1435 aa3.4□□□□□ -1.87
SSD1YDR293C CHD1P32657 1468 aa3.4□□□□□ -1.87
SSD1YDR293C RKR1Q04781 1562 aa3.39□□□□□ -1.87
SSD1YDR293C YCF1P39109 1515 aaKnown RBP3.39□□□□□ -1.87
SSD1YDR293C VPS70P47161 811 aa3.38□□□□□ -1.87
SSD1YDR293C CST9Q06032 482 aa3.38□□□□□ -1.87
SSD1YDR293C CDC25P04821 1589 aa3.38□□□□□ -1.87
SSD1YDR293C OXP1P28273 1286 aa3.38□□□□□ -1.87
SSD1YDR293C YLR271WQ06152 274 aa3.37□□□□□ -1.87
SSD1YDR293C HOP09932 586 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-LR1P0C2J3 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-FP0CX63 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-GR2P0CX64 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-CP25384 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-DR2Q03494 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY1B-DR1Q03855 1755 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-DR3Q07791 1770 aaKnown RBP3.37□□□□□ -1.87
SSD1YDR293C TY2B-OR1Q12113 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-DR1Q12472 1770 aa3.37□□□□□ -1.87
SSD1YDR293C TY2B-OR2Q12501 1770 aa3.37□□□□□ -1.87
SSD1YDR293C YOR093CQ12275 1648 aa3.37□□□□□ -1.87
SSD1YDR293C BPT1P14772 1559 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 83 ms