RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C GET3Q12154 354 aaKnown RBP5.76□□□□□ -1.49
SCM3YDL139C RRG1Q12167 365 aaPredicted RBP5.76□□□□□ -1.49
SCM3YDL139C PHR1P05066 565 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SCM3YDL139C INO1P11986 533 aa5.75□□□□□ -1.49
SCM3YDL139C DBP5P20449 482 aaKnown RBP5.75□□□□□ -1.49
SCM3YDL139C AGP1P25376 633 aa5.75□□□□□ -1.49
SCM3YDL139C STE5P32917 917 aa5.75□□□□□ -1.49
SCM3YDL139C ALG3P38179 458 aa5.75□□□□□ -1.49
SCM3YDL139C ATG14P38270 344 aa5.75□□□□□ -1.49
SCM3YDL139C BUD6P41697 788 aa5.75□□□□□ -1.49
SCM3YDL139C YPT11P48559 417 aa5.75□□□□□ -1.49
SCM3YDL139C MRD1Q06106 887 aaKnown RBP5.75□□□□□ -1.49
SCM3YDL139C SGD1Q06132 899 aa5.75□□□□□ -1.49
SCM3YDL139C YPL216WQ08964 1102 aa5.75□□□□□ -1.49
SCM3YDL139C GRX6Q12438 231 aa5.75□□□□□ -1.49
SCM3YDL139C DDP1Q99321 188 aaKnown RBP5.75□□□□□ -1.49
SCM3YDL139C NFS1P25374 497 aa5.74□□□□□ -1.49
SCM3YDL139C SBA1P28707 216 aaKnown RBP5.74□□□□□ -1.49
SCM3YDL139C VBA5P36172 582 aa5.74□□□□□ -1.49
SCM3YDL139C RRP8P38961 392 aaKnown RBP5.74□□□□□ -1.49
SCM3YDL139C CNN1P43618 361 aa5.74□□□□□ -1.49
SCM3YDL139C TIM54P47045 478 aa5.74□□□□□ -1.49
SCM3YDL139C HUL5P53119 910 aa5.74□□□□□ -1.49
SCM3YDL139C AFT2Q08957 416 aa5.74□□□□□ -1.49
SCM3YDL139C YPL066WQ12194 479 aa5.74□□□□□ -1.49
SCM3YDL139C NSI1Q12457 570 aa5.74□□□□□ -1.49
SCM3YDL139C YLR278CQ05854 1341 aa5.74□□□□□ -1.49
SCM3YDL139C CBP1P07252 654 aa5.73□□□□□ -1.49
SCM3YDL139C HPR1P17629 752 aaKnown RBP5.73□□□□□ -1.49
SCM3YDL139C RNR3P21672 869 aaKnown RBP5.73□□□□□ -1.49
SCM3YDL139C PUF4P25339 888 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
SCM3YDL139C GSY2P27472 705 aa5.73□□□□□ -1.49
SCM3YDL139C MCM7P38132 845 aa5.73□□□□□ -1.49
SCM3YDL139C YBR184WP38299 523 aa5.73□□□□□ -1.49
SCM3YDL139C PNT1P38969 423 aa5.73□□□□□ -1.49
SCM3YDL139C YGL138CP53122 345 aa5.73□□□□□ -1.49
SCM3YDL139C ADY4Q05955 493 aa5.73□□□□□ -1.49
SCM3YDL139C SKG3Q06315 1026 aa5.73□□□□□ -1.49
SCM3YDL139C YDL124WQ07551 312 aaKnown RBP5.73□□□□□ -1.49
SCM3YDL139C PSR2Q07949 397 aa5.73□□□□□ -1.49
SCM3YDL139C DSE3Q08729 430 aa5.73□□□□□ -1.49
SCM3YDL139C NUC1P08466 329 aa5.72□□□□□ -1.49
SCM3YDL139C CIT2P08679 460 aa5.72□□□□□ -1.49
SCM3YDL139C CBP3P21560 335 aa5.72□□□□□ -1.49
SCM3YDL139C ADP1P25371 1049 aa5.72□□□□□ -1.49
SCM3YDL139C BMH2P34730 273 aaKnown RBP5.72□□□□□ -1.49
SCM3YDL139C PBP2P38151 413 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
SCM3YDL139C RTT107P38850 1070 aa5.72□□□□□ -1.49
SCM3YDL139C SHC1P39000 512 aa5.72□□□□□ -1.49
SCM3YDL139C ULP2P40537 1034 aaPredicted RBP5.72□□□□□ -1.49
SCM3YDL139C MPH1P40562 993 aa5.72□□□□□ -1.49
SCM3YDL139C YGR153WP48238 217 aa5.72□□□□□ -1.49
SCM3YDL139C ALT1P52893 592 aa5.72□□□□□ -1.49
SCM3YDL139C PIL1P53252 339 aaKnown RBP5.72□□□□□ -1.49
SCM3YDL139C RPT6Q01939 405 aaKnown RBP5.72□□□□□ -1.49
SCM3YDL139C RPN4Q03465 531 aa5.72□□□□□ -1.49
SCM3YDL139C WAR1Q03631 944 aa5.72□□□□□ -1.49
SCM3YDL139C SHE9Q04172 456 aa5.72□□□□□ -1.49
SCM3YDL139C LCD1Q04377 747 aa5.72□□□□□ -1.49
SCM3YDL139C EIS1Q05050 843 aaKnown RBP5.72□□□□□ -1.49
SCM3YDL139C SMD2Q06217 110 aaKnown RBP5.72□□□□□ -1.49
SCM3YDL139C APL4Q12028 832 aa5.72□□□□□ -1.49
SCM3YDL139C SES1P07284 462 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C PRE8P23639 250 aa5.71□□□□□ -1.5
SCM3YDL139C MLS1P30952 554 aa5.71□□□□□ -1.5
SCM3YDL139C SMY2P32909 740 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C PXL1P36166 706 aa5.71□□□□□ -1.5
SCM3YDL139C YBL028CP38202 106 aa5.71□□□□□ -1.5
SCM3YDL139C RFT1P38206 574 aaPredicted RBP5.71□□□□□ -1.5
SCM3YDL139C NMD3P38861 518 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C TIF4631P39935 952 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C OYE3P41816 400 aaPredicted RBP5.71□□□□□ -1.5
SCM3YDL139C YGL176CP46945 554 aa5.71□□□□□ -1.5
SCM3YDL139C MDM1Q01846 1127 aa5.71□□□□□ -1.5
SCM3YDL139C TIM50Q02776 476 aa5.71□□□□□ -1.5
SCM3YDL139C VPS30Q02948 557 aa5.71□□□□□ -1.5
SCM3YDL139C YDR341CQ05506 607 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C PSK2Q08217 1101 aa5.71□□□□□ -1.5
SCM3YDL139C YOR059CQ08448 450 aaKnown RBP5.71□□□□□ -1.5
SCM3YDL139C LAP2Q10740 671 aa5.71□□□□□ -1.5
SCM3YDL139C RKM4Q12504 494 aa5.71□□□□□ -1.5
SCM3YDL139C TUS1Q06412 1307 aa5.71□□□□□ -1.5
SCM3YDL139C CIT1P00890 479 aa5.7□□□□□ -1.5
SCM3YDL139C THS1P04801 734 aaKnown RBP5.7□□□□□ -1.5
SCM3YDL139C SRM1P21827 482 aa5.7□□□□□ -1.5
SCM3YDL139C YKL107WP34251 309 aa5.7□□□□□ -1.5
SCM3YDL139C LRG1P35688 1017 aa5.7□□□□□ -1.5
SCM3YDL139C MRP8P35719 219 aa5.7□□□□□ -1.5
SCM3YDL139C RGD1P38339 666 aa5.7□□□□□ -1.5
SCM3YDL139C YHR020WP38708 688 aaKnown RBP5.7□□□□□ -1.5
SCM3YDL139C HNT2P49775 206 aa5.7□□□□□ -1.5
SCM3YDL139C RNH70P53331 553 aa5.7□□□□□ -1.5
SCM3YDL139C FOL1P53848 824 aa5.7□□□□□ -1.5
SCM3YDL139C UBX2Q04228 584 aa5.7□□□□□ -1.5
SCM3YDL139C AIM33Q04516 312 aa5.7□□□□□ -1.5
SCM3YDL139C TMA64Q04600 565 aaKnown RBP5.7□□□□□ -1.5
SCM3YDL139C RSA3Q05942 220 aaKnown RBP5.7□□□□□ -1.5
SCM3YDL139C YOR131CQ12486 218 aa5.7□□□□□ -1.5
SCM3YDL139C ECM29P38737 1868 aa5.69□□□□□ -1.5
SCM3YDL139C YEL076C-AP0CX16 216 aa5.69□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms