RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W HTS1P07263 546 aaKnown RBP7.3□□□□□ -1.24
MSP1YGR028W MAS2P11914 482 aa7.3□□□□□ -1.24
MSP1YGR028W RPL8AP17076 256 aaKnown RBP7.3□□□□□ -1.24
MSP1YGR028W MCM5P29496 775 aaKnown RBP7.3□□□□□ -1.24
MSP1YGR028W GPT2P36148 743 aa7.3□□□□□ -1.24
MSP1YGR028W ALG2P43636 503 aa7.3□□□□□ -1.24
MSP1YGR028W RPS7BP48164 190 aaKnown RBP7.3□□□□□ -1.24
MSP1YGR028W EAR1Q03212 550 aa7.3□□□□□ -1.24
MSP1YGR028W VIP1Q06685 1146 aaKnown RBP7.3□□□□□ -1.24
MSP1YGR028W ISA1Q07821 250 aaPredicted RBP7.3□□□□□ -1.24
MSP1YGR028W RTP1Q12751 981 aa7.3□□□□□ -1.24
MSP1YGR028W TPM1P17536 199 aaKnown RBP7.29□□□□□ -1.24
MSP1YGR028W PWP2P25635 923 aaKnown RBP7.29□□□□□ -1.24
MSP1YGR028W RPT1P33299 467 aaKnown RBP7.29□□□□□ -1.24
MSP1YGR028W PRY1P47032 299 aa7.29□□□□□ -1.24
MSP1YGR028W GCV1P48015 400 aa7.29□□□□□ -1.24
MSP1YGR028W ASE1P50275 885 aa7.29□□□□□ -1.24
MSP1YGR028W ARI1P53111 347 aaKnown RBP7.29□□□□□ -1.24
MSP1YGR028W MON1P53129 644 aa7.29□□□□□ -1.24
MSP1YGR028W TY1A-NL1Q12391 440 aaKnown RBP7.29□□□□□ -1.24
MSP1YGR028W CIT1P00890 479 aa7.28□□□□□ -1.24
MSP1YGR028W STI1P15705 589 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
MSP1YGR028W RNR3P21672 869 aaKnown RBP7.28□□□□□ -1.24
MSP1YGR028W SEC8P32855 1065 aa7.28□□□□□ -1.24
MSP1YGR028W ARL1P38116 183 aaKnown RBP7.28□□□□□ -1.24
MSP1YGR028W AKR1P39010 764 aa7.28□□□□□ -1.24
MSP1YGR028W TPM2P40414 161 aa7.28□□□□□ -1.24
MSP1YGR028W VID28P40547 921 aa7.28□□□□□ -1.24
MSP1YGR028W KRI1P42846 591 aaKnown RBP7.28□□□□□ -1.24
MSP1YGR028W DAL4Q04895 635 aa7.28□□□□□ -1.24
MSP1YGR028W UGA4P32837 571 aa7.27□□□□□ -1.25
MSP1YGR028W YKL077WP36081 392 aa7.27□□□□□ -1.25
MSP1YGR028W CCT8P47079 568 aaKnown RBP7.27□□□□□ -1.25
MSP1YGR028W PTA1Q01329 785 aaPredicted RBP7.27□□□□□ -1.25
MSP1YGR028W YDR341CQ05506 607 aaKnown RBP7.27□□□□□ -1.25
MSP1YGR028W TY1B-AO13527 1196 aaKnown RBP7.26□□□□□ -1.25
MSP1YGR028W MET6P05694 767 aaKnown RBP7.26□□□□□ -1.25
MSP1YGR028W CAD1P24813 409 aaKnown RBP7.26□□□□□ -1.25
MSP1YGR028W POT1P27796 417 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
MSP1YGR028W SUL1P38359 859 aa7.26□□□□□ -1.25
MSP1YGR028W EPL1P43572 832 aa7.26□□□□□ -1.25
MSP1YGR028W SGM1P47166 707 aa7.26□□□□□ -1.25
MSP1YGR028W NOG1Q02892 647 aaKnown RBP7.26□□□□□ -1.25
MSP1YGR028W YLL058WQ12198 575 aa7.26□□□□□ -1.25
MSP1YGR028W HEM1P09950 548 aaPredicted RBP7.25□□□□□ -1.25
MSP1YGR028W HCA4P20448 770 aaKnown RBP7.25□□□□□ -1.25
MSP1YGR028W TIM23P32897 222 aa7.25□□□□□ -1.25
MSP1YGR028W LSB3P43603 459 aaKnown RBP7.25□□□□□ -1.25
MSP1YGR028W AZR1P50080 613 aa7.25□□□□□ -1.25
MSP1YGR028W MSC2Q03455 724 aa7.25□□□□□ -1.25
MSP1YGR028W SMD2Q06217 110 aaKnown RBP7.25□□□□□ -1.25
MSP1YGR028W ARP6Q12509 438 aa7.25□□□□□ -1.25
MSP1YGR028W ATG11Q12527 1178 aa7.25□□□□□ -1.25
MSP1YGR028W SES1P07284 462 aaKnown RBP7.24□□□□□ -1.25
MSP1YGR028W FOL2P51601 243 aaKnown RBP7.24□□□□□ -1.25
MSP1YGR028W ARP5P53946 755 aa7.24□□□□□ -1.25
MSP1YGR028W SVF1Q05515 481 aa7.24□□□□□ -1.25
MSP1YGR028W RRP15Q06511 250 aaPredicted RBP7.24□□□□□ -1.25
MSP1YGR028W YOR223WQ12015 292 aa7.24□□□□□ -1.25
MSP1YGR028W HXK1P04806 485 aaKnown RBP7.23□□□□□ -1.25
MSP1YGR028W SNA3P14359 133 aa7.23□□□□□ -1.25
MSP1YGR028W TVP23P38962 199 aa7.23□□□□□ -1.25
MSP1YGR028W HUL5P53119 910 aa7.23□□□□□ -1.25
MSP1YGR028W ADI1Q03677 179 aa7.23□□□□□ -1.25
MSP1YGR028W WHI4Q07655 649 aaKnown RBP7.23□□□□□ -1.25
MSP1YGR028W YDR034W-BQ6Q5X2 51 aa7.23□□□□□ -1.25
MSP1YGR028W ECM29P38737 1868 aa7.22□□□□□ -1.25
MSP1YGR028W YMR084WA2P2R3 262 aa7.22□□□□□ -1.25
MSP1YGR028W ATE1P16639 503 aa7.22□□□□□ -1.25
MSP1YGR028W ERS1P17261 260 aa7.22□□□□□ -1.25
MSP1YGR028W KIN82P25341 720 aa7.22□□□□□ -1.25
MSP1YGR028W SQT1P35184 431 aa7.22□□□□□ -1.25
MSP1YGR028W UBP11P36026 717 aa7.22□□□□□ -1.25
MSP1YGR028W PCI8P40512 444 aa7.22□□□□□ -1.25
MSP1YGR028W SAD1P43589 448 aa7.22□□□□□ -1.25
MSP1YGR028W NCE103P53615 221 aa7.22□□□□□ -1.25
MSP1YGR028W ORC4P54791 529 aa7.22□□□□□ -1.25
MSP1YGR028W YPL109CQ02981 657 aa7.22□□□□□ -1.25
MSP1YGR028W AIM33Q04516 312 aa7.22□□□□□ -1.25
MSP1YGR028W MCD1Q12158 566 aa7.22□□□□□ -1.25
MSP1YGR028W SWI4P25302 1093 aaKnown RBP7.21□□□□□ -1.26
MSP1YGR028W RXT2P38255 430 aa7.21□□□□□ -1.26
MSP1YGR028W SPO22P40511 975 aa7.21□□□□□ -1.26
MSP1YGR028W RSM26P47141 266 aa7.21□□□□□ -1.26
MSP1YGR028W CRD1Q07560 283 aa7.21□□□□□ -1.26
MSP1YGR028W REC8Q12188 680 aa7.21□□□□□ -1.26
MSP1YGR028W CDC48P25694 835 aaKnown RBP7.2□□□□□ -1.26
MSP1YGR028W TVP38P36164 337 aa7.2□□□□□ -1.26
MSP1YGR028W EXO5P38289 585 aa7.2□□□□□ -1.26
MSP1YGR028W REI1P38344 393 aaPredicted RBP7.2□□□□□ -1.26
MSP1YGR028W CCT3P39077 534 aaKnown RBP7.2□□□□□ -1.26
MSP1YGR028W JHD1P40034 492 aa7.2□□□□□ -1.26
MSP1YGR028W MRPS18P42847 217 aa7.2□□□□□ -1.26
MSP1YGR028W ENT3P47160 408 aa7.2□□□□□ -1.26
MSP1YGR028W PSP2P50109 593 aaKnown RBP7.2□□□□□ -1.26
MSP1YGR028W BNI5P53890 448 aaKnown RBP7.2□□□□□ -1.26
MSP1YGR028W OYE2Q03558 400 aaKnown RBP7.2□□□□□ -1.26
MSP1YGR028W ILV1P00927 576 aaKnown RBP7.19□□□□□ -1.26
MSP1YGR028W TAF13P11747 167 aa7.19□□□□□ -1.26
MSP1YGR028W VPS1P21576 704 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms