RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	PGI1	P12709	554 aa	Known RBP	3.21	□□□□□ -1.9
SPB1	YCL054W	YRO2	P38079	344 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	TED1	P40533	473 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	RSC8	P43609	557 aa	Known RBP	3.21	□□□□□ -1.9
SPB1	YCL054W	VPS53	P47061	822 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	YGR130C	P53278	816 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	UBX4	P54730	416 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	YLL054C	Q12244	843 aa		3.21	□□□□□ -1.9
SPB1	YCL054W	HMG1	P12683	1054 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	PPH3	P32345	308 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	PRP19	P32523	503 aa	Known RBP	3.2	□□□□□ -1.9
SPB1	YCL054W	REC104	P33323	182 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	YKL222C	P35995	705 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	YKR073C	P36153	106 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	SPC105	P53148	917 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	ECM9	Q02202	377 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	SPO21	Q12411	609 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	TY4B-P	A0A0B7P3V8	1104 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	ADE8	P04161	214 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	HOG1	P32485	435 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	EMC3	P36039	253 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	YBR238C	P38330	731 aa	Known RBP	3.2	□□□□□ -1.9
SPB1	YCL054W	NMD3	P38861	518 aa	Known RBP	3.2	□□□□□ -1.9
SPB1	YCL054W	BRE4	Q07660	1125 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	RCL1	Q08096	367 aa	Predicted RBP	3.2	□□□□□ -1.9
SPB1	YCL054W	MET7	Q08645	548 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	NYV1	Q12255	253 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	TY4A-H	Q6Q5P6	413 aa		3.2	□□□□□ -1.9
SPB1	YCL054W	IKI3	Q06706	1349 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	USO1	P25386	1790 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	TRP3	P00937	484 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	SNF5	P18480	905 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	MSB1	P21339	1137 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	HXT6	P39003	570 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	HXT7	P39004	570 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	CCT5	P40413	562 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	GZF3	P42944	551 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	ELA1	P53861	379 aa	Predicted RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	YTM1	Q12024	460 aa	Predicted RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	ELG1	Q12050	791 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	NUP188	P52593	1655 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	SSM4	P40318	1319 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	CYC7	P00045	113 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	RPS21A	P0C0V8	87 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	YEF3	P16521	1044 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	NFS1	P25374	497 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	PER1	P25625	357 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	CCR4	P31384	837 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	HEM12	P32347	362 aa	Predicted RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	SER1	P33330	395 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	STO1	P34160	861 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	UGA2	P38067	497 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	EXO84	P38261	753 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	VID27	P40157	782 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	PBP1	P53297	722 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	TMA64	Q04600	565 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	NBA1	Q08229	501 aa	Known RBP	3.19	□□□□□ -1.9
SPB1	YCL054W	ACM1	Q08981	209 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	LAP2	Q10740	671 aa		3.19	□□□□□ -1.9
SPB1	YCL054W	VMR1	P38735	1592 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	GLT1	Q12680	2145 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	PRO1	P32264	428 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	ELM1	P32801	640 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	MAE1	P36013	669 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	TRZ1	P36159	838 aa	Predicted RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	GIC1	P38785	314 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	SNP1	Q00916	300 aa	Predicted RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	BRE1	Q07457	700 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	GUD1	Q07729	489 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	IML1	P47170	1584 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	PDR5	P33302	1511 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	AEP2	P22136	580 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	KTR4	P38131	464 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	YHL041W	P38730	149 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	RPN3	P40016	523 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	MNN11	P46985	422 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	YJL045W	P47052	634 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	GYP7	P48365	746 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	SRP1	Q02821	542 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	COG8	Q04632	607 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	YMR074C	Q04773	145 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	YLR257W	Q06146	321 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
SPB1	YCL054W	MDM38	Q08179	573 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	GUP2	Q08929	609 aa		3.18	□□□□□ -1.9
SPB1	YCL054W	RRP6	Q12149	733 aa	Known RBP	3.18	□□□□□ -1.9
SPB1	YCL054W	BI4	P03879	638 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	MSS18	P08593	268 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	MPH2	P0CD99	609 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	YCL002C	P25565	263 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	NIC96	P34077	839 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	RPT2	P40327	437 aa	Known RBP	3.17	□□□□□ -1.9
SPB1	YCL054W	CCM1	P48237	864 aa	Predicted RBP	3.17	□□□□□ -1.9
SPB1	YCL054W	COG4	Q06096	861 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	KCC4	P25389	1037 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	PTP2	P29461	750 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	YKR078W	P36158	585 aa	Known RBP	3.17	□□□□□ -1.9
SPB1	YCL054W	ATG14	P38270	344 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	ERP2	P39704	215 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	DAM1	P53267	343 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms