RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W MTC1P47018 478 aaKnown RBP8.21□□□□□ -1.1
SPB1YCL054W FAP1P53971 965 aa7.86□□□□□ -1.15
SPB1YCL054W DRS1P32892 752 aaKnown RBP7.4□□□□□ -1.22
SPB1YCL054W PRY3P47033 881 aa7.35□□□□□ -1.23
SPB1YCL054W AAD16Q02895 342 aa7.15□□□□□ -1.26
SPB1YCL054W PRI1P10363 409 aa7.06□□□□□ -1.28
SPB1YCL054W ISW2Q08773 1120 aa6.98□□□□□ -1.29
SPB1YCL054W HAA1Q12753 694 aaKnown RBP6.92□□□□□ -1.3
SPB1YCL054W RPG1P38249 964 aaKnown RBP6.83□□□□□ -1.32
SPB1YCL054W TSR3Q12094 313 aaKnown RBP6.69□□□□□ -1.34
SPB1YCL054W YCK3P39962 524 aa6.64□□□□□ -1.35
SPB1YCL054W DIP2Q12220 943 aaPredicted RBP6.57□□□□□ -1.36
SPB1YCL054W MRPL32P25348 183 aa6.55□□□□□ -1.36
SPB1YCL054W RSE1Q04693 1361 aaKnown RBP6.51□□□□□ -1.37
SPB1YCL054W REB1P21538 810 aa6.37□□□□□ -1.39
SPB1YCL054W YGL015CP33199 130 aa6.34□□□□□ -1.39
SPB1YCL054W RPL17AP05740 184 aaKnown RBP6.3□□□□□ -1.4
SPB1YCL054W RPL17BP46990 184 aaKnown RBP6.3□□□□□ -1.4
SPB1YCL054W AVT3P36062 692 aa6.16□□□□□ -1.42
SPB1YCL054W BFR2Q06631 534 aaKnown RBP6.09□□□□□ -1.43
SPB1YCL054W TFA1P36100 482 aa6.09□□□□□ -1.43
SPB1YCL054W UBP10P53874 792 aaPredicted RBP5.98□□□□□ -1.45
SPB1YCL054W CDC27P38042 758 aa5.97□□□□□ -1.45
SPB1YCL054W BUD31P25337 157 aaPredicted RBP5.87□□□□□ -1.47
SPB1YCL054W MAP2P38174 421 aaKnown RBP5.87□□□□□ -1.47
SPB1YCL054W SPT21P35209 758 aa5.87□□□□□ -1.47
SPB1YCL054W YKR023WP36119 530 aaKnown RBP5.87□□□□□ -1.47
SPB1YCL054W TIF4632P39936 914 aaKnown RBP5.83□□□□□ -1.48
SPB1YCL054W HOP09932 586 aa5.81□□□□□ -1.48
SPB1YCL054W TFC8Q12308 588 aa5.8□□□□□ -1.48
SPB1YCL054W UBP9P39967 754 aa5.76□□□□□ -1.49
SPB1YCL054W SLX5P32828 619 aaKnown RBP5.75□□□□□ -1.49
SPB1YCL054W SCY1P53009 804 aa5.75□□□□□ -1.49
SPB1YCL054W DCD1P06773 312 aa5.74□□□□□ -1.49
SPB1YCL054W TGL3P40308 642 aa5.71□□□□□ -1.5
SPB1YCL054W SIS1P25294 352 aaKnown RBP5.69□□□□□ -1.5
SPB1YCL054W RIM101P33400 625 aa5.64□□□□□ -1.51
SPB1YCL054W BCH2P36122 765 aa5.58□□□□□ -1.52
SPB1YCL054W YIL055CP40523 627 aaKnown RBP5.52□□□□□ -1.53
SPB1YCL054W PTP3P40048 928 aa5.5□□□□□ -1.53
SPB1YCL054W EPS1P40557 701 aa5.47□□□□□ -1.53
SPB1YCL054W BBC1P47068 1157 aa5.45□□□□□ -1.54
SPB1YCL054W YOR238WQ08634 303 aa5.44□□□□□ -1.54
SPB1YCL054W BDF1P35817 686 aa5.42□□□□□ -1.54
SPB1YCL054W RQC2Q12532 1038 aaKnown RBP5.39□□□□□ -1.55
SPB1YCL054W OXP1P28273 1286 aa5.38□□□□□ -1.55
SPB1YCL054W YAP5P40574 245 aa5.36□□□□□ -1.55
SPB1YCL054W RSM7P47150 247 aa5.36□□□□□ -1.55
SPB1YCL054W GTT3P39996 337 aa5.35□□□□□ -1.55
SPB1YCL054W YBL029C-AQ3E756 94 aa5.35□□□□□ -1.55
SPB1YCL054W MST1P07236 462 aa5.34□□□□□ -1.55
SPB1YCL054W NSR1P27476 414 aaKnown RBP RIP-Chip data5.34□□□□□ -1.56not detected
SPB1YCL054W SPP1Q03012 353 aa5.32□□□□□ -1.56
SPB1YCL054W YAH1Q12184 172 aaKnown RBP5.32□□□□□ -1.56
SPB1YCL054W AI2P03876 854 aa5.31□□□□□ -1.56
SPB1YCL054W WSC3Q12215 556 aa5.3□□□□□ -1.56
SPB1YCL054W YJL171CP46992 396 aa5.29□□□□□ -1.56
SPB1YCL054W VNX1P42839 908 aa5.28□□□□□ -1.56
SPB1YCL054W TIF11P38912 153 aaKnown RBP5.23□□□□□ -1.57
SPB1YCL054W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
SPB1YCL054W DMA1P38823 416 aa5.17□□□□□ -1.58
SPB1YCL054W ULI1P43604 169 aa5.16□□□□□ -1.58
SPB1YCL054W FKH1P40466 484 aa5.15□□□□□ -1.58
SPB1YCL054W EAP1P36041 632 aaKnown RBP5.14□□□□□ -1.59
SPB1YCL054W BMT6Q12291 365 aa5.14□□□□□ -1.59
SPB1YCL054W AIR2Q12476 344 aaKnown RBP5.13□□□□□ -1.59
SPB1YCL054W MSB4Q12317 492 aa5.12□□□□□ -1.59
SPB1YCL054W LDB19Q12502 818 aa5.12□□□□□ -1.59
SPB1YCL054W PIB1Q06651 286 aa5.12□□□□□ -1.59
SPB1YCL054W YLR271WQ06152 274 aa5.11□□□□□ -1.59
SPB1YCL054W MRM1P25270 412 aa5.1□□□□□ -1.59
SPB1YCL054W TFG1P41895 735 aaPredicted RBP5.07□□□□□ -1.6
SPB1YCL054W PSD2P53037 1138 aaKnown RBP5.07□□□□□ -1.6
SPB1YCL054W SSP1P38871 571 aa5.06□□□□□ -1.6
SPB1YCL054W TAF7Q05021 590 aa5.05□□□□□ -1.6
SPB1YCL054W YMR1P47147 688 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SPB1YCL054W SET4P42948 560 aa5.03□□□□□ -1.6
SPB1YCL054W IOC2Q12072 812 aa5.03□□□□□ -1.6
SPB1YCL054W RTG1P32607 177 aa5.03□□□□□ -1.6
SPB1YCL054W YOL036WQ08206 761 aa5.02□□□□□ -1.61
SPB1YCL054W NCR1Q12200 1170 aa5.02□□□□□ -1.61
SPB1YCL054W RTG3P38165 486 aa5.01□□□□□ -1.61
SPB1YCL054W YNL035CP53962 389 aaKnown RBP5□□□□□ -1.61
SPB1YCL054W DBP1P24784 617 aaKnown RBP4.99□□□□□ -1.61
SPB1YCL054W TRP5P00931 707 aaKnown RBP4.99□□□□□ -1.61
SPB1YCL054W SEC61P32915 480 aa4.99□□□□□ -1.61
SPB1YCL054W ABP1P15891 592 aaKnown RBP4.98□□□□□ -1.61
SPB1YCL054W MGA2P40578 1113 aa4.98□□□□□ -1.61
SPB1YCL054W YFR006WP43590 535 aa4.96□□□□□ -1.62
SPB1YCL054W VMA1P17255 1071 aaKnown RBP4.95□□□□□ -1.62
SPB1YCL054W JIP4Q03361 876 aa4.94□□□□□ -1.62
SPB1YCL054W SAM3Q08986 587 aa4.93□□□□□ -1.62
SPB1YCL054W VPS29P38759 282 aa4.92□□□□□ -1.62
SPB1YCL054W GYP5Q12344 894 aa4.92□□□□□ -1.62
SPB1YCL054W HTA1P04911 132 aaKnown RBP4.9□□□□□ -1.62
SPB1YCL054W HTA2P04912 132 aa4.9□□□□□ -1.62
SPB1YCL054W SAP30P38429 201 aa4.9□□□□□ -1.63
SPB1YCL054W LEO1P38439 464 aa4.9□□□□□ -1.63
SPB1YCL054W CST9Q06032 482 aa4.9□□□□□ -1.63
SPB1YCL054W YDL129WQ07555 291 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms