RNA–Protein interactions for RNA: YBR115C

LYS2, Transcript of Alpha aminoadipate reductase, yeast

Gene LYS2, Length 4,179 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS2	YBR115C	SSZ1	P38788	538 aa	Known RBP	4.72	□□□□□ -1.65
LYS2	YBR115C	YHR218W	P38899	603 aa		4.72	□□□□□ -1.65
LYS2	YBR115C	OYE2	Q03558	400 aa	Known RBP	4.72	□□□□□ -1.65
LYS2	YBR115C	STB3	Q12427	513 aa		4.72	□□□□□ -1.65
LYS2	YBR115C	LAA1	P39526	2014 aa		4.71	□□□□□ -1.65
LYS2	YBR115C	SSB1	P11484	613 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	COQ1	P18900	473 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	SUI2	P20459	304 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	SQT1	P35184	431 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	YHL026C	P38740	315 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	GGA2	P38817	585 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	SSB2	P40150	613 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	KRE33	P53914	1056 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	DBP9	Q06218	594 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	MRI1	Q06489	411 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	TSR2	Q06672	205 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	TOR1	P35169	2470 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	SNF1	P06782	633 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	VPS35	P34110	944 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	CRG1	P38892	291 aa	RIP-Chip data	4.71	□□□□□ -1.66	not detected
LYS2	YBR115C	YGR053C	P53234	283 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	RPT6	Q01939	405 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	MEX67	Q99257	599 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	NOT3	P06102	836 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	PCK1	P10963	549 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	CLB3	P24870	427 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	SEC21	P32074	935 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	ECM21	P38167	1117 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	TUB4	P53378	473 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	YNL035C	P53962	389 aa	Known RBP	4.71	□□□□□ -1.66
LYS2	YBR115C	DID2	P69771	204 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	SPC19	Q03954	165 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	FLC1	Q08967	793 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	IOC2	Q12072	812 aa		4.71	□□□□□ -1.66
LYS2	YBR115C	PEP12	P32854	288 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	NIP100	P33420	868 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	YKR015C	P36111	568 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	MUM2	P38236	366 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	SLX8	P40072	274 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	FMS1	P50264	508 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	MSH6	Q03834	1242 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	SXM1	Q04175	944 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	YDR341C	Q05506	607 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	RUP1	Q12242	671 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	VPS33	P20795	691 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	MSH2	P25847	964 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	DPH2	P32461	534 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	OPY1	P38271	328 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	NEM1	P38757	446 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	ALA1	P40825	983 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	BDP1	P46678	594 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	FYV8	P46949	817 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	PGK1	P00560	416 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	CYC8	P14922	966 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	SRP54	P20424	541 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	KIN3	P22209	435 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
LYS2	YBR115C	APM2	P38700	605 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	YLF2	P38746	405 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	YNG2	P38806	282 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	MKT1	P40850	830 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	PSP2	P50109	593 aa	Known RBP	4.7	□□□□□ -1.66
LYS2	YBR115C	COG6	P53959	839 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	VTA1	Q06263	330 aa		4.7	□□□□□ -1.66
LYS2	YBR115C	VAM7	P32912	316 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	RXT2	P38255	430 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	HSM3	P38348	480 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	ZPR1	P53303	486 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	CLU1	Q03690	1277 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	SEG1	Q04279	960 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	LSO1	Q3E827	93 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	RPL8B	P29453	256 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	PDR3	P33200	976 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	RPT1	P33299	467 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	LAM1	P38851	1228 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	EMP65	P40085	556 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	RPS7B	P48164	190 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	ALT2	P52892	507 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	RKM2	Q03942	479 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	TFC6	Q06339	672 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	HAP2	P06774	265 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	OTU2	P38747	307 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	CCT3	P39077	534 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	KAP123	P40069	1113 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	CDC40	P40968	455 aa	Predicted RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	SWC4	P53201	476 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	ALO1	P54783	526 aa	Known RBP	4.69	□□□□□ -1.66
LYS2	YBR115C	YDL121C	Q07541	149 aa		4.69	□□□□□ -1.66
LYS2	YBR115C	SUP45	P12385	437 aa	Known RBP	4.68	□□□□□ -1.66
LYS2	YBR115C	NOP16	P40007	231 aa	Known RBP	4.68	□□□□□ -1.66
LYS2	YBR115C	VID28	P40547	921 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	SPN1	Q06505	410 aa	Predicted RBP	4.68	□□□□□ -1.66
LYS2	YBR115C	RPC53	P25441	422 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	YKR078W	P36158	585 aa	Known RBP	4.68	□□□□□ -1.66
LYS2	YBR115C	ISW1	P38144	1129 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	CCC2	P38995	1004 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	SPC72	P39723	622 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	GYP8	P43570	497 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	NUP84	P52891	726 aa		4.68	□□□□□ -1.66
LYS2	YBR115C	HDA1	P53973	706 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms