RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	SPO22	P40511	975 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	ALG2	P43636	503 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	HOS2	P53096	452 aa	Predicted RBP	1.65	□□□□□ -2.15
SSK2	YNR031C	LSB1	P53281	241 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	YPR172W	Q06608	200 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	YPR097W	Q06839	1073 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	RRD2	Q12461	358 aa		1.65	□□□□□ -2.15
SSK2	YNR031C	HIS5	P07172	385 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SFA1	P32771	386 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	MNR2	P35724	969 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	BYE1	P36106	594 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	BEM4	P39011	633 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	ARB1	P40024	610 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	RIM21	P48565	533 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	PIP2	P52960	996 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SUR7	P54003	302 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	RRB1	Q04225	511 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	VPS20	Q04272	221 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SGO1	Q08490	590 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	BI4	P03879	638 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SEC14	P24280	304 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	YKR078W	P36158	585 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	SIZ1	Q04195	904 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	GGA1	Q06336	557 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	OSH2	Q12451	1283 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	RAD3	P06839	778 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SNF3	P10870	884 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	ECM32	P32644	1121 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	TFC4	P33339	1025 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	PTC3	P34221	468 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	TRZ1	P36159	838 aa	Predicted RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	SPC97	P38863	823 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SLN1	P39928	1220 aa	Predicted RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	RSC1	P53236	928 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	YDL073W	Q07454	984 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SUB2	Q07478	446 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	WRS1	Q12109	432 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	YPL066W	Q12194	479 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	PNS1	Q12412	539 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	ARG82	P07250	355 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	FUB1	P25659	250 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	MFT1	P33441	392 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	WBP1	P33767	430 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	TOM20	P35180	183 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	VPS41	P38959	992 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	STN1	P38960	494 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	LTP1	P40347	161 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	SHQ1	P40486	507 aa	Predicted RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	TFG1	P41895	735 aa	Predicted RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	SGM1	P47166	707 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	DAK1	P54838	584 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	SYH1	Q02875	849 aa	Known RBP	1.64	□□□□□ -2.15
SSK2	YNR031C	YOL019W	Q08157	551 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	CEX1	Q12453	761 aa		1.64	□□□□□ -2.15
SSK2	YNR031C	PDC1	P06169	563 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	PIF1	P07271	859 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	RRN6	P32786	894 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	ARC19	P33204	171 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	PEX5	P35056	612 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	MRPL7	P36519	292 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	TIF4631	P39935	952 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	BNI5	P53890	448 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	PUF6	Q04373	656 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	UFO1	Q04511	668 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	PCL8	Q08966	492 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	SIA1	Q12212	622 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	1.63	□□□□□ -2.15	not detected
SSK2	YNR031C	BRR1	Q99177	341 aa	Predicted RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	1.63	□□□□□ -2.15	not detected
SSK2	YNR031C	DBP2	P24783	546 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	LCB1	P25045	558 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	YJU2	P28320	278 aa	Predicted RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	ISF1	P32488	338 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	SEC8	P32855	1065 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	FUI1	P38196	639 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	MED8	P38304	223 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	PRE3	P38624	215 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	PSA1	P41940	361 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	ITC1	P53125	1264 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	JJJ1	P53863	590 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	ESC2	Q06340	456 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	NKP1	Q12493	238 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	NOP58	Q12499	511 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	YPR015C	Q12531	247 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	CDC19	P00549	500 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	HTA1	P04911	132 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	HTA2	P04912	132 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	PAT1	P25644	796 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	CBF2	P32504	956 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	STE5	P32917	917 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	EFM2	P38347	419 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	SPL2	P38839	148 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	SAP1	P39955	897 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	LSB6	P42951	607 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	NUP42	P49686	430 aa	Known RBP	1.63	□□□□□ -2.15
SSK2	YNR031C	YML119W	Q03208	357 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	PDS5	Q04264	1277 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	ARR2	Q06597	130 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	ARP7	Q12406	477 aa		1.63	□□□□□ -2.15
SSK2	YNR031C	ERP4	Q12450	207 aa		1.63	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms