RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC58	YLR033W	YKU70	P32807	602 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	KTR3	P38130	404 aa	Predicted RBP	4.93	□□□□□ -1.62
RSC58	YLR033W	LAM1	P38851	1228 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	MEF2	P39677	819 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	YNL193W	P53870	558 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	RMD1	Q03441	430 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	RPN7	Q06103	429 aa	Known RBP	4.93	□□□□□ -1.62
RSC58	YLR033W	SGD1	Q06132	899 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	NKP2	Q06162	153 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	ADR1	P07248	1323 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	POM152	P39685	1337 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	PDR18	P53756	1333 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	GSC2	P40989	1895 aa		4.93	□□□□□ -1.62
RSC58	YLR033W	NOT3	P06102	836 aa	Known RBP	4.92	□□□□□ -1.62
RSC58	YLR033W	SEC20	P28791	383 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	RSM26	P47141	266 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	YGL242C	P53066	181 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	IRC4	Q03036	179 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	ROT1	Q03691	256 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	NBA1	Q08229	501 aa	Known RBP	4.92	□□□□□ -1.62
RSC58	YLR033W	RRI2	Q12348	645 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	WHI5	Q12416	295 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	CYC1	P00044	109 aa	Predicted RBP	4.92	□□□□□ -1.62
RSC58	YLR033W	ECM21	P38167	1117 aa	Known RBP	4.92	□□□□□ -1.62
RSC58	YLR033W	PPX1	P38698	397 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	GSM1	P42950	618 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	MLC1	P53141	149 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	GCN5	Q03330	439 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	TOS4	Q06266	489 aa		4.92	□□□□□ -1.62
RSC58	YLR033W	VMA4	P22203	233 aa	Known RBP	4.91	□□□□□ -1.62
RSC58	YLR033W	LCB1	P25045	558 aa	Known RBP	4.91	□□□□□ -1.62
RSC58	YLR033W	HEM3	P28789	327 aa		4.91	□□□□□ -1.62
RSC58	YLR033W	RPT3	P33298	428 aa	Known RBP	4.91	□□□□□ -1.62
RSC58	YLR033W	YIR042C	P40586	236 aa		4.91	□□□□□ -1.62
RSC58	YLR033W	ECM16	Q04217	1267 aa	Known RBP	4.91	□□□□□ -1.62
RSC58	YLR033W	UBX2	Q04228	584 aa		4.91	□□□□□ -1.62
RSC58	YLR033W	RAD50	P12753	1312 aa		4.9	□□□□□ -1.63
RSC58	YLR033W	CDC16	P09798	840 aa		4.9	□□□□□ -1.63
RSC58	YLR033W	CIC1	P38779	376 aa	Known RBP	4.9	□□□□□ -1.63
RSC58	YLR033W	SHC1	P39000	512 aa		4.9	□□□□□ -1.63
RSC58	YLR033W	NUG1	P40010	520 aa	Known RBP	4.9	□□□□□ -1.63
RSC58	YLR033W	INM2	Q05533	292 aa		4.9	□□□□□ -1.63
RSC58	YLR033W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	RIP-Chip
RSC58	YLR033W	NOP2	P40991	618 aa	Known RBP	4.89	□□□□□ -1.63
RSC58	YLR033W	PIB2	P53191	635 aa		4.89	□□□□□ -1.63
RSC58	YLR033W	MRPS35	P53292	345 aa		4.89	□□□□□ -1.63
RSC58	YLR033W	SPO21	Q12411	609 aa		4.89	□□□□□ -1.63
RSC58	YLR033W	FLO11	P08640	1367 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	PIF1	P07271	859 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	AFG2	P32794	780 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	SQT1	P35184	431 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	PBY1	P38254	753 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	PEX28	P38848	579 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	GPB2	P39717	880 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	YMR147W	P40218	223 aa	Known RBP	4.88	□□□□□ -1.63
RSC58	YLR033W	ULP1	Q02724	621 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	PLB2	Q03674	706 aa		4.88	□□□□□ -1.63
RSC58	YLR033W	BRE1	Q07457	700 aa	Known RBP	4.88	□□□□□ -1.63
RSC58	YLR033W	RRG1	Q12167	365 aa	Predicted RBP	4.88	□□□□□ -1.63
RSC58	YLR033W	VAS1	P07806	1104 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	MSM1	P22438	575 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	KIP1	P28742	1111 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	MET4	P32389	672 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	PTK1	P36002	662 aa	Predicted RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	ADD66	P36040	267 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	YFH7	P43591	353 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	VPS53	P47061	822 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	ENV11	P53246	860 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	TRM44	Q02648	567 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	PRP42	Q03776	544 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	DAL4	Q04895	635 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	WRS1	Q12109	432 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	THS1	P04801	734 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	RPS9B	P05755	195 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	RPS7A	P26786	190 aa	Known RBP	4.87	□□□□□ -1.63
RSC58	YLR033W	TRM2	P33753	639 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	STV1	P37296	890 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	GRX7	P38068	203 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	BRN1	P38170	754 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	VPS4	P52917	437 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	RSB1	Q08417	382 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	RIM20	Q12033	661 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	PUS9	Q12069	462 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	FLO1	P32768	1537 aa		4.87	□□□□□ -1.63
RSC58	YLR033W	HEM13	P11353	328 aa	Known RBP	4.86	□□□□□ -1.63
RSC58	YLR033W	ATE1	P16639	503 aa		4.86	□□□□□ -1.63
RSC58	YLR033W	SEC26	P41810	973 aa	Known RBP	4.86	□□□□□ -1.63
RSC58	YLR033W	HNT2	P49775	206 aa		4.86	□□□□□ -1.63
RSC58	YLR033W	PSF3	Q12146	194 aa		4.86	□□□□□ -1.63
RSC58	YLR033W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RSC58	YLR033W	RDH54	P38086	958 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	CCZ1	P38273	704 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	SLI1	P53304	468 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	HXT17	P53631	564 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	DUS4	Q06063	367 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	FPR4	Q06205	392 aa	Predicted RBP	4.85	□□□□□ -1.63
RSC58	YLR033W	RRP15	Q06511	250 aa	Predicted RBP	4.85	□□□□□ -1.63
RSC58	YLR033W	TOM1	Q03280	3268 aa		4.85	□□□□□ -1.63
RSC58	YLR033W	SNF3	P10870	884 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms