RNA–Protein interactions for RNA: YLR033W

RSC58, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC58, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC58YLR033W MTC1P47018 478 aaKnown RBP15.11■□□□□ 0.01
RSC58YLR033W FAP1P53971 965 aa14.31□□□□□ -0.12
RSC58YLR033W DRS1P32892 752 aaKnown RBP13.61□□□□□ -0.23
RSC58YLR033W PRY3P47033 881 aa13.44□□□□□ -0.26
RSC58YLR033W PRI1P10363 409 aa13.04□□□□□ -0.32
RSC58YLR033W AAD16Q02895 342 aa13.04□□□□□ -0.32
RSC58YLR033W YCK3P39962 524 aa12.65□□□□□ -0.38
RSC58YLR033W ISW2Q08773 1120 aa12.64□□□□□ -0.39
RSC58YLR033W RPG1P38249 964 aaKnown RBP12.57□□□□□ -0.4
RSC58YLR033W HAA1Q12753 694 aaKnown RBP12.51□□□□□ -0.41
RSC58YLR033W TSR3Q12094 313 aaKnown RBP12.36□□□□□ -0.43
RSC58YLR033W DIP2Q12220 943 aaPredicted RBP12.12□□□□□ -0.47
RSC58YLR033W RSE1Q04693 1361 aaKnown RBP11.85□□□□□ -0.51
RSC58YLR033W MRPL32P25348 183 aa11.84□□□□□ -0.51
RSC58YLR033W REB1P21538 810 aa11.55□□□□□ -0.56
RSC58YLR033W RPL17AP05740 184 aaKnown RBP11.54□□□□□ -0.56
RSC58YLR033W RPL17BP46990 184 aaKnown RBP11.54□□□□□ -0.56
RSC58YLR033W YGL015CP33199 130 aa11.49□□□□□ -0.57
RSC58YLR033W AVT3P36062 692 aa11.49□□□□□ -0.57
RSC58YLR033W CDC27P38042 758 aa11.17□□□□□ -0.62
RSC58YLR033W BFR2Q06631 534 aaKnown RBP11.04□□□□□ -0.64
RSC58YLR033W YKR023WP36119 530 aaKnown RBP10.99□□□□□ -0.65
RSC58YLR033W SPT21P35209 758 aa10.94□□□□□ -0.66
RSC58YLR033W MAP2P38174 421 aaKnown RBP10.89□□□□□ -0.67
RSC58YLR033W UBP10P53874 792 aaPredicted RBP10.84□□□□□ -0.67
RSC58YLR033W HOP09932 586 aa10.81□□□□□ -0.68
RSC58YLR033W DCD1P06773 312 aa10.8□□□□□ -0.68
RSC58YLR033W TFC8Q12308 588 aa10.75□□□□□ -0.69
RSC58YLR033W BUD31P25337 157 aaPredicted RBP10.74□□□□□ -0.69
RSC58YLR033W SCY1P53009 804 aa10.57□□□□□ -0.72
RSC58YLR033W RIM101P33400 625 aa10.46□□□□□ -0.74
RSC58YLR033W SLX5P32828 619 aaKnown RBP10.44□□□□□ -0.74
RSC58YLR033W TIF4632P39936 914 aaKnown RBP10.43□□□□□ -0.74
RSC58YLR033W BCH2P36122 765 aa10.4□□□□□ -0.74
RSC58YLR033W TGL3P40308 642 aa10.38□□□□□ -0.75
RSC58YLR033W UBP9P39967 754 aa10.24□□□□□ -0.77
RSC58YLR033W SIS1P25294 352 aaKnown RBP10.23□□□□□ -0.77
RSC58YLR033W OXP1P28273 1286 aa10.12□□□□□ -0.79
RSC58YLR033W EPS1P40557 701 aa10.09□□□□□ -0.79
RSC58YLR033W BDF1P35817 686 aa10.07□□□□□ -0.8
RSC58YLR033W PTP3P40048 928 aa10.01□□□□□ -0.81
RSC58YLR033W YIL055CP40523 627 aaKnown RBP9.98□□□□□ -0.81
RSC58YLR033W YBL029C-AQ3E756 94 aa9.87□□□□□ -0.83
RSC58YLR033W MST1P07236 462 aa9.86□□□□□ -0.83
RSC58YLR033W YOR238WQ08634 303 aa9.85□□□□□ -0.83
RSC58YLR033W RSM7P47150 247 aa9.81□□□□□ -0.84
RSC58YLR033W BBC1P47068 1157 aa9.8□□□□□ -0.84
RSC58YLR033W YAH1Q12184 172 aaKnown RBP9.8□□□□□ -0.84
RSC58YLR033W AI2P03876 854 aa9.77□□□□□ -0.84
RSC58YLR033W VNX1P42839 908 aa9.72□□□□□ -0.85
RSC58YLR033W NSR1P27476 414 aaKnown RBP RIP-Chip data9.7□□□□□ -0.86not detected
RSC58YLR033W YAP5P40574 245 aa9.69□□□□□ -0.86
RSC58YLR033W WSC3Q12215 556 aa9.66□□□□□ -0.86
RSC58YLR033W SPP1Q03012 353 aa9.63□□□□□ -0.87
RSC58YLR033W YLR271WQ06152 274 aa9.56□□□□□ -0.88
RSC58YLR033W GTT3P39996 337 aa9.51□□□□□ -0.89
RSC58YLR033W PIB1Q06651 286 aa9.49□□□□□ -0.89
RSC58YLR033W TIF11P38912 153 aaKnown RBP9.48□□□□□ -0.89
RSC58YLR033W PSD2P53037 1138 aaKnown RBP9.44□□□□□ -0.9
RSC58YLR033W AIR2Q12476 344 aaKnown RBP9.44□□□□□ -0.9
RSC58YLR033W TFA1P36100 482 aa9.43□□□□□ -0.9
RSC58YLR033W MRM1P25270 412 aa9.41□□□□□ -0.9
RSC58YLR033W YJL171CP46992 396 aa9.41□□□□□ -0.9
RSC58YLR033W FKH1P40466 484 aa9.39□□□□□ -0.91
RSC58YLR033W ULI1P43604 169 aa9.36□□□□□ -0.91
RSC58YLR033W LDB19Q12502 818 aa9.36□□□□□ -0.91
RSC58YLR033W IOC2Q12072 812 aa9.32□□□□□ -0.92
RSC58YLR033W SSP1P38871 571 aa9.29□□□□□ -0.92
RSC58YLR033W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
RSC58YLR033W BMT6Q12291 365 aa9.23□□□□□ -0.93
RSC58YLR033W SET4P42948 560 aa9.22□□□□□ -0.93
RSC58YLR033W CST9Q06032 482 aa9.21□□□□□ -0.93
RSC58YLR033W MSB4Q12317 492 aa9.21□□□□□ -0.94
RSC58YLR033W DBP1P24784 617 aaKnown RBP9.2□□□□□ -0.94
RSC58YLR033W YFR006WP43590 535 aa9.2□□□□□ -0.94
RSC58YLR033W VPS29P38759 282 aa9.19□□□□□ -0.94
RSC58YLR033W YOL036WQ08206 761 aa9.19□□□□□ -0.94
RSC58YLR033W EAP1P36041 632 aaKnown RBP9.18□□□□□ -0.94
RSC58YLR033W YMR1P47147 688 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
RSC58YLR033W TRP5P00931 707 aaKnown RBP9.15□□□□□ -0.94
RSC58YLR033W RTG1P32607 177 aa9.15□□□□□ -0.95
RSC58YLR033W RTG3P38165 486 aa9.15□□□□□ -0.95
RSC58YLR033W STS1P38637 319 aa9.11□□□□□ -0.95
RSC58YLR033W MGA2P40578 1113 aa9.1□□□□□ -0.95
RSC58YLR033W NCR1Q12200 1170 aa9.1□□□□□ -0.95
RSC58YLR033W VMA1P17255 1071 aaKnown RBP9.1□□□□□ -0.95
RSC58YLR033W RCR1P38212 213 aa9.05□□□□□ -0.96
RSC58YLR033W YNL035CP53962 389 aaKnown RBP9.05□□□□□ -0.96
RSC58YLR033W SAM3Q08986 587 aa9.01□□□□□ -0.97
RSC58YLR033W SEC61P32915 480 aa9□□□□□ -0.97
RSC58YLR033W TFG1P41895 735 aaPredicted RBP8.94□□□□□ -0.98
RSC58YLR033W SAP30P38429 201 aa8.91□□□□□ -0.98
RSC58YLR033W GYP5Q12344 894 aa8.91□□□□□ -0.98
RSC58YLR033W DAN4P47179 1161 aa8.9□□□□□ -0.99
RSC58YLR033W DCW1P36091 449 aa8.89□□□□□ -0.99
RSC58YLR033W JIP4Q03361 876 aa8.87□□□□□ -0.99
RSC58YLR033W HTA1P04911 132 aaKnown RBP8.85□□□□□ -0.99
RSC58YLR033W HTA2P04912 132 aa8.85□□□□□ -0.99
RSC58YLR033W ABP1P15891 592 aaKnown RBP8.84□□□□□ -0.99
RSC58YLR033W YDL129WQ07555 291 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms