RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	RBL2	P48606	106 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	ATG1	P53104	897 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	MEC3	Q02574	474 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	LGE1	Q02796	332 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	NBL1	Q3E7Y6	73 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	SEM1	O94742	89 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	GAL2	P13181	574 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	CLN3	P13365	580 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	SRV2	P17555	526 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	CDC11	P32458	415 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	SQT1	P35184	431 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	JNM1	P36224	373 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	UBX7	P38349	436 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	MID1	P41821	548 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	RPC17	P47076	161 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	MSB3	P48566	633 aa	Predicted RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	ROM1	P53046	1155 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	COG6	P53959	839 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	MRD1	Q06106	887 aa	Known RBP	4.58	□□□□□ -1.68
UPC2	YDR213W	RRI2	Q12348	645 aa		4.58	□□□□□ -1.68
UPC2	YDR213W	ERG11	P10614	530 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	MCM1	P11746	286 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	YCR051W	P25631	222 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	UBC6	P33296	250 aa	Predicted RBP	4.57	□□□□□ -1.68
UPC2	YDR213W	APP1	P53933	587 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	VPS16	Q03308	798 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	INP2	Q03824	705 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	HFD1	Q04458	532 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	OXR1	Q08952	273 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	TAF10	Q12030	206 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	TUF1	P02992	437 aa	Known RBP	4.57	□□□□□ -1.68
UPC2	YDR213W	NUC1	P08466	329 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	CBP3	P21560	335 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	OPI1	P21957	404 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	MET4	P32389	672 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	GCG1	P32656	232 aa	Known RBP	4.57	□□□□□ -1.68
UPC2	YDR213W	MET1	P36150	593 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	PXA1	P41909	870 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	GCN20	P43535	752 aa	Known RBP	4.57	□□□□□ -1.68
UPC2	YDR213W	IOC3	P43596	787 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	RPA14	P50106	137 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	YGR016W	P53209	190 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	PLP1	Q04004	230 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	YDR278C	Q05612	105 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	INP54	Q08227	384 aa	Known RBP	4.57	□□□□□ -1.68
UPC2	YDR213W	NCA2	Q12374	616 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	SAC3	P46674	1301 aa		4.57	□□□□□ -1.68
UPC2	YDR213W	ARG82	P07250	355 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	KEX2	P13134	814 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	GCD6	P32501	712 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	PEA2	P40091	420 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	PDS1	P40316	373 aa	Predicted RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	PCI8	P40512	444 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	SHE10	P53075	577 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	UTP22	P53254	1237 aa	Predicted RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	ASI1	P54074	624 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	SPN1	Q06505	410 aa	Predicted RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	TSR1	Q07381	788 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	PSR1	Q07800	427 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	FRA1	Q07825	749 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	PPM2	Q08282	695 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	NEW1	Q08972	1196 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	CHS5	Q12114	671 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	MSS116	P15424	664 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	SEC2	P17065	759 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	SPS22	P25380	463 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	YKL091C	P33324	310 aa	Known RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	SEG2	P34250	1132 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	MMM1	P41800	426 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	EMP47	P43555	445 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	YNL040W	P53960	456 aa	Predicted RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	CTF4	Q01454	927 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	MGR3	Q04472	501 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	TFC6	Q06339	672 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	GPI13	Q07830	1017 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	NSE1	Q07913	336 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	LAM6	Q08001	693 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	RUP1	Q12242	671 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	SNU66	Q12420	587 aa	Predicted RBP	4.56	□□□□□ -1.68
UPC2	YDR213W	TY4B-H	P0C2J7	1802 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	TY4B-J	P47024	1803 aa		4.56	□□□□□ -1.68
UPC2	YDR213W	ADH4	P10127	382 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
UPC2	YDR213W	OM45	P16547	393 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	BMH1	P29311	267 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	SIN4	P32259	974 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	SMC1	P32908	1225 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	TFG1	P41895	735 aa	Predicted RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	STB1	P42845	420 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	TAF1	P46677	1066 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	ACS2	P52910	683 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	TEL2	P53038	688 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	ZIP2	P53061	704 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	RIM8	P53179	542 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	HOP2	P53187	214 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	YNL247W	P53852	767 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	TMA64	Q04600	565 aa	Known RBP	4.55	□□□□□ -1.68
UPC2	YDR213W	ARR1	Q06596	294 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	ATG13	Q06628	738 aa		4.55	□□□□□ -1.68
UPC2	YDR213W	ABP140	Q08641	628 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms