RNA–Protein interactions for RNA: YDR165W

TRM82, Transcript of Catalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM82, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM82	YDR165W	EFT1	P32324	842 aa	Known RBP	4.6	□□□□□ -1.67
TRM82	YDR165W	SRP40	P32583	406 aa	Predicted RBP	4.6	□□□□□ -1.67
TRM82	YDR165W	RPL8B	P29453	256 aa	Known RBP	4.59	□□□□□ -1.67
TRM82	YDR165W	TOK1	P40310	691 aa		4.59	□□□□□ -1.67
TRM82	YDR165W	SDP1	P40479	209 aa		4.59	□□□□□ -1.67
TRM82	YDR165W	ALR2	P43553	858 aa		4.59	□□□□□ -1.67
TRM82	YDR165W	LAS17	Q12446	633 aa		4.59	□□□□□ -1.67
TRM82	YDR165W	CAD1	P24813	409 aa	Known RBP	4.58	□□□□□ -1.68
TRM82	YDR165W	TYE7	P33122	291 aa	Predicted RBP	4.58	□□□□□ -1.68
TRM82	YDR165W	OAR1	P35731	278 aa		4.58	□□□□□ -1.68
TRM82	YDR165W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
TRM82	YDR165W	EAF1	Q06337	982 aa		4.58	□□□□□ -1.68
TRM82	YDR165W	OSH2	Q12451	1283 aa		4.58	□□□□□ -1.68
TRM82	YDR165W	TAD3	Q9URQ3	322 aa		4.58	□□□□□ -1.68
TRM82	YDR165W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
TRM82	YDR165W	PET10	P36139	283 aa		4.57	□□□□□ -1.68
TRM82	YDR165W	CTF8	P38877	133 aa		4.57	□□□□□ -1.68
TRM82	YDR165W	OSW7	P43611	510 aa		4.57	□□□□□ -1.68
TRM82	YDR165W	YKR011C	Q02209	353 aa		4.57	□□□□□ -1.68
TRM82	YDR165W	SSL1	Q04673	461 aa	Predicted RBP	4.57	□□□□□ -1.68
TRM82	YDR165W	YOR131C	Q12486	218 aa		4.57	□□□□□ -1.68
TRM82	YDR165W	MPH2	P0CD99	609 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	RAD53	P22216	821 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	ERG4	P25340	473 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	YKL091C	P33324	310 aa	Known RBP	4.56	□□□□□ -1.68
TRM82	YDR165W	YIL108W	P40483	696 aa	Known RBP	4.56	□□□□□ -1.68
TRM82	YDR165W	BUL1	P48524	976 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	HDA1	P53973	706 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	NSE3	Q05541	303 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	CDC53	Q12018	815 aa	Known RBP	4.56	□□□□□ -1.68
TRM82	YDR165W	YPR071W	Q12346	211 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	HBN1	Q96VH4	193 aa		4.56	□□□□□ -1.68
TRM82	YDR165W	HSP60	P19882	572 aa	Known RBP	4.55	□□□□□ -1.68
TRM82	YDR165W	ARE1	P25628	610 aa		4.55	□□□□□ -1.68
TRM82	YDR165W	URA1	P28272	314 aa	Predicted RBP	4.55	□□□□□ -1.68
TRM82	YDR165W	PEX19	Q07418	342 aa		4.55	□□□□□ -1.68
TRM82	YDR165W	SWM1	Q12379	170 aa		4.55	□□□□□ -1.68
TRM82	YDR165W	TRM11	Q12463	433 aa		4.55	□□□□□ -1.68
TRM82	YDR165W	RPS9A	O13516	197 aa	Known RBP	4.54	□□□□□ -1.68
TRM82	YDR165W	SEC21	P32074	935 aa	Known RBP	4.54	□□□□□ -1.68
TRM82	YDR165W	CEP3	P40969	608 aa		4.54	□□□□□ -1.68
TRM82	YDR165W	NIT3	P49954	291 aa		4.54	□□□□□ -1.68
TRM82	YDR165W	NOG2	P53742	486 aa	Known RBP	4.54	□□□□□ -1.68
TRM82	YDR165W	ERG5	P54781	538 aa		4.54	□□□□□ -1.68
TRM82	YDR165W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
TRM82	YDR165W	SLU7	Q02775	382 aa	Known RBP	4.54	□□□□□ -1.68
TRM82	YDR165W	YLR040C	Q07988	224 aa		4.54	□□□□□ -1.68
TRM82	YDR165W	YOL073C	Q08232	322 aa		4.54	□□□□□ -1.68
TRM82	YDR165W	CIT1	P00890	479 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	RAD4	P14736	754 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	CTF13	P35203	478 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	YBR284W	P38150	797 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	MOH1	P38191	138 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	SUL1	P38359	859 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	NMD2	P38798	1089 aa	Known RBP	4.53	□□□□□ -1.68
TRM82	YDR165W	HUL4	P40985	892 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	RNT1	Q02555	471 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	UBX5	Q06682	500 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	PPM2	Q08282	695 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	ENV7	Q12003	364 aa		4.53	□□□□□ -1.68
TRM82	YDR165W	MSD1	P15179	658 aa	Known RBP	4.52	□□□□□ -1.69
TRM82	YDR165W	RPD3	P32561	433 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	YHR078W	P38799	552 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	TIM54	P47045	478 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	PUS2	P53167	370 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	RPN4	Q03465	531 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	OMS1	Q06668	471 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	BDF2	Q07442	638 aa		4.52	□□□□□ -1.69
TRM82	YDR165W	YDL124W	Q07551	312 aa	Known RBP	4.52	□□□□□ -1.69
TRM82	YDR165W	ERT1	P38140	529 aa		4.51	□□□□□ -1.69
TRM82	YDR165W	GGA2	P38817	585 aa	Known RBP	4.51	□□□□□ -1.69
TRM82	YDR165W	UBP6	P43593	499 aa	Known RBP	4.51	□□□□□ -1.69
TRM82	YDR165W	HUL5	P53119	910 aa		4.51	□□□□□ -1.69
TRM82	YDR165W	DAM1	P53267	343 aa		4.51	□□□□□ -1.69
TRM82	YDR165W	PPR1	P07272	904 aa	Predicted RBP	4.5	□□□□□ -1.69
TRM82	YDR165W	MET3	P08536	511 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	TUB3	P09734	445 aa	Known RBP	4.5	□□□□□ -1.69
TRM82	YDR165W	CYS3	P31373	394 aa	Known RBP	4.5	□□□□□ -1.69
TRM82	YDR165W	NGG1	P32494	702 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	PPG1	P32838	368 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	EMC3	P36039	253 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	UBA2	P52488	636 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	YGR125W	P53273	1036 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	TIM44	Q01852	431 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	TAF8	Q03750	510 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	ACF2	Q12168	779 aa		4.5	□□□□□ -1.69
TRM82	YDR165W	ALG7	P07286	448 aa		4.49	□□□□□ -1.69
TRM82	YDR165W	RNH70	P53331	553 aa		4.49	□□□□□ -1.69
TRM82	YDR165W	DLT1	Q04216	342 aa		4.49	□□□□□ -1.69
TRM82	YDR165W	REH1	Q06709	432 aa		4.49	□□□□□ -1.69
TRM82	YDR165W	BRN1	P38170	754 aa		4.48	□□□□□ -1.69
TRM82	YDR165W	CHZ1	P40019	153 aa	Predicted RBP	4.48	□□□□□ -1.69
TRM82	YDR165W	YGR283C	P53336	341 aa	Predicted RBP	4.48	□□□□□ -1.69
TRM82	YDR165W	DUS1	P53759	423 aa	Known RBP	4.48	□□□□□ -1.69
TRM82	YDR165W	ASI2	P53895	289 aa		4.48	□□□□□ -1.69
TRM82	YDR165W	FLC1	Q08967	793 aa		4.48	□□□□□ -1.69
TRM82	YDR165W	CIT2	P08679	460 aa		4.47	□□□□□ -1.69
TRM82	YDR165W	TOP3	P13099	656 aa		4.47	□□□□□ -1.69
TRM82	YDR165W	YPT53	P36019	220 aa		4.47	□□□□□ -1.69
TRM82	YDR165W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms