RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C DLT1Q04216 342 aa2.59□□□□□ -1.99
SSS1YDR086C PEX19Q07418 342 aa2.59□□□□□ -1.99
SSS1YDR086C BDF2Q07442 638 aa2.59□□□□□ -1.99
SSS1YDR086C OPI10Q08202 246 aa2.59□□□□□ -1.99
SSS1YDR086C SWM1Q12379 170 aa2.59□□□□□ -1.99
SSS1YDR086C SEC21P32074 935 aaKnown RBP2.58□□□□□ -2
SSS1YDR086C AAR2P32357 355 aaPredicted RBP2.58□□□□□ -2
SSS1YDR086C MTH1P35198 433 aa2.58□□□□□ -2
SSS1YDR086C CTF13P35203 478 aa2.58□□□□□ -2
SSS1YDR086C YHL017WP38745 532 aa2.58□□□□□ -2
SSS1YDR086C CTF8P38877 133 aa2.58□□□□□ -2
SSS1YDR086C SSL1Q04673 461 aaPredicted RBP2.58□□□□□ -2
SSS1YDR086C JIP5Q06214 492 aaPredicted RBP2.58□□□□□ -2
SSS1YDR086C RFA1P22336 621 aaKnown RBP2.57□□□□□ -2
SSS1YDR086C RPD3P32561 433 aa2.57□□□□□ -2
SSS1YDR086C TYE7P33122 291 aaPredicted RBP2.57□□□□□ -2
SSS1YDR086C AFR1P33304 620 aa2.57□□□□□ -2
SSS1YDR086C ERT1P38140 529 aa2.57□□□□□ -2
SSS1YDR086C ELO3P40319 345 aa2.57□□□□□ -2
SSS1YDR086C IRR1P40541 1150 aa2.57□□□□□ -2
SSS1YDR086C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SSS1YDR086C FRE5Q08908 694 aa2.57□□□□□ -2
SSS1YDR086C NDJ1Q12366 352 aa2.57□□□□□ -2
SSS1YDR086C TRM13Q12383 476 aa2.57□□□□□ -2
SSS1YDR086C CAF20P12962 161 aaKnown RBP2.56□□□□□ -2
SSS1YDR086C PRP9P19736 530 aaKnown RBP2.56□□□□□ -2
SSS1YDR086C ILV6P25605 309 aaKnown RBP2.56□□□□□ -2
SSS1YDR086C CDC11P32458 415 aa2.56□□□□□ -2
SSS1YDR086C SPC42P36094 363 aa2.56□□□□□ -2
SSS1YDR086C YRO2P38079 344 aa2.56□□□□□ -2
SSS1YDR086C YIL108WP40483 696 aaKnown RBP2.56□□□□□ -2
SSS1YDR086C SDS3P40505 327 aa2.56□□□□□ -2
SSS1YDR086C SNM1P40993 198 aa2.56□□□□□ -2
SSS1YDR086C GND2P53319 492 aa2.56□□□□□ -2
SSS1YDR086C YKR011CQ02209 353 aa2.56□□□□□ -2
SSS1YDR086C MUK1Q02866 612 aa2.56□□□□□ -2
SSS1YDR086C LCD1Q04377 747 aa2.56□□□□□ -2
SSS1YDR086C ADY4Q05955 493 aa2.56□□□□□ -2
SSS1YDR086C NGG1P32494 702 aa2.55□□□□□ -2
SSS1YDR086C AMA1P50082 593 aa2.55□□□□□ -2
SSS1YDR086C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SSS1YDR086C TUB3P09734 445 aaKnown RBP2.54□□□□□ -2
SSS1YDR086C GFA1P14742 717 aaKnown RBP2.54□□□□□ -2
SSS1YDR086C URA1P28272 314 aaPredicted RBP2.54□□□□□ -2
SSS1YDR086C REC104P33323 182 aa2.54□□□□□ -2
SSS1YDR086C YHR078WP38799 552 aa2.54□□□□□ -2
SSS1YDR086C VAC8P39968 578 aa2.54□□□□□ -2
SSS1YDR086C CEP3P40969 608 aa2.54□□□□□ -2
SSS1YDR086C ALD6P54115 500 aaKnown RBP2.54□□□□□ -2
SSS1YDR086C BUL2Q03758 920 aaKnown RBP2.54□□□□□ -2
SSS1YDR086C RPS9AO13516 197 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C MPH2P0CD99 609 aa2.53□□□□□ -2
SSS1YDR086C CDC43P18898 376 aa2.53□□□□□ -2
SSS1YDR086C HCA4P20448 770 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C HBS1P32769 611 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C STE5P32917 917 aa2.53□□□□□ -2
SSS1YDR086C PPS1P38148 807 aa2.53□□□□□ -2
SSS1YDR086C RPP1P38786 293 aa2.53□□□□□ -2
SSS1YDR086C TOK1P40310 691 aa2.53□□□□□ -2
SSS1YDR086C FKH2P41813 862 aa2.53□□□□□ -2
SSS1YDR086C PUS2P53167 370 aa2.53□□□□□ -2
SSS1YDR086C NOG2P53742 486 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C RIA1P53893 1110 aa2.53□□□□□ -2
SSS1YDR086C ASI2P53895 289 aa2.53□□□□□ -2
SSS1YDR086C HDA1P53973 706 aa2.53□□□□□ -2
SSS1YDR086C LGE1Q02796 332 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C PKH1Q03407 766 aa2.53□□□□□ -2
SSS1YDR086C TDA5Q06417 326 aaKnown RBP2.53□□□□□ -2
SSS1YDR086C YBR184WP38299 523 aa2.52□□□□□ -2.01
SSS1YDR086C SPF1P39986 1215 aaKnown RBP2.52□□□□□ -2.01
SSS1YDR086C MUP1P50276 574 aa2.52□□□□□ -2.01
SSS1YDR086C COQ11Q05892 277 aa2.52□□□□□ -2.01
SSS1YDR086C MRH1Q12117 320 aaPredicted RBP2.52□□□□□ -2.01
SSS1YDR086C YBR284WP38150 797 aa2.51□□□□□ -2.01
SSS1YDR086C YBR053CP38235 358 aa2.51□□□□□ -2.01
SSS1YDR086C VHR1P40522 640 aa2.51□□□□□ -2.01
SSS1YDR086C YIR042CP40586 236 aa2.51□□□□□ -2.01
SSS1YDR086C PFD1P46988 109 aa2.51□□□□□ -2.01
SSS1YDR086C YJL163CP46996 555 aa2.51□□□□□ -2.01
SSS1YDR086C NIT3P49954 291 aa2.51□□□□□ -2.01
SSS1YDR086C UTP8P53276 713 aaKnown RBP2.51□□□□□ -2.01
SSS1YDR086C MRPS35P53292 345 aa2.51□□□□□ -2.01
SSS1YDR086C CRR1Q05790 422 aa2.51□□□□□ -2.01
SSS1YDR086C YPR071WQ12346 211 aa2.51□□□□□ -2.01
SSS1YDR086C ATG11Q12527 1178 aa2.51□□□□□ -2.01
SSS1YDR086C TUB1P09733 447 aaKnown RBP2.5□□□□□ -2.01
SSS1YDR086C PRP4P20053 465 aaKnown RBP2.5□□□□□ -2.01
SSS1YDR086C DMC1P25453 334 aa2.5□□□□□ -2.01
SSS1YDR086C PZF1P39933 429 aa2.5□□□□□ -2.01
SSS1YDR086C YIL166CP40445 542 aa2.5□□□□□ -2.01
SSS1YDR086C ALR2P43553 858 aa2.5□□□□□ -2.01
SSS1YDR086C HSV2P50079 448 aaPredicted RBP2.5□□□□□ -2.01
SSS1YDR086C DUS1P53759 423 aaKnown RBP2.5□□□□□ -2.01
SSS1YDR086C NRG1Q03125 231 aa2.5□□□□□ -2.01
SSS1YDR086C SPO75Q07798 868 aa2.5□□□□□ -2.01
SSS1YDR086C SGO1Q08490 590 aa2.5□□□□□ -2.01
SSS1YDR086C YLR415CO13578 112 aa2.49□□□□□ -2.01
SSS1YDR086C LAT1P12695 482 aaKnown RBP2.49□□□□□ -2.01
SSS1YDR086C KIN3P22209 435 aa2.49□□□□□ -2.01
SSS1YDR086C CYS3P31373 394 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms