RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C SPO11P23179 398 aa14.6□□□□□ -0.07
SSA1YAL005C DPH2P32461 534 aa14.6□□□□□ -0.07
SSA1YAL005C CUL3P53202 744 aa14.6□□□□□ -0.07
SSA1YAL005C HFI1Q12060 488 aa14.6□□□□□ -0.07
SSA1YAL005C PHO13P19881 312 aa14.6□□□□□ -0.07
SSA1YAL005C MUD1P32605 298 aaKnown RBP14.6□□□□□ -0.07
SSA1YAL005C RTT107P38850 1070 aa14.6□□□□□ -0.07
SSA1YAL005C JJJ3P47138 172 aa14.6□□□□□ -0.07
SSA1YAL005C MNP1P53163 194 aaPredicted RBP14.6□□□□□ -0.07
SSA1YAL005C VPS75P53853 264 aa14.6□□□□□ -0.07
SSA1YAL005C CHS2P14180 963 aa14.59□□□□□ -0.07
SSA1YAL005C VID24P38263 362 aa14.59□□□□□ -0.07
SSA1YAL005C STR2P47164 639 aa14.59□□□□□ -0.07
SSA1YAL005C HFM1P51979 1187 aa14.59□□□□□ -0.07
SSA1YAL005C TIM8P57744 87 aa14.59□□□□□ -0.07
SSA1YAL005C PIB1Q06651 286 aa14.59□□□□□ -0.07
SSA1YAL005C WHI2P12611 486 aa14.58□□□□□ -0.07
SSA1YAL005C FYV8P46949 817 aaKnown RBP14.58□□□□□ -0.07
SSA1YAL005C UTP14Q04500 899 aaKnown RBP14.58□□□□□ -0.07
SSA1YAL005C YDR524C-BQ3E6R4 66 aa14.58□□□□□ -0.07
SSA1YAL005C RIF1P29539 1916 aa14.58□□□□□ -0.08
SSA1YAL005C SDH2P21801 266 aa14.58□□□□□ -0.08
SSA1YAL005C TVP23P38962 199 aa14.58□□□□□ -0.08
SSA1YAL005C DON1Q05610 365 aa14.58□□□□□ -0.08
SSA1YAL005C SSB1P11484 613 aaKnown RBP14.57□□□□□ -0.08
SSA1YAL005C APL1P27351 700 aa14.57□□□□□ -0.08
SSA1YAL005C EFM2P38347 419 aa14.57□□□□□ -0.08
SSA1YAL005C SSB2P40150 613 aaKnown RBP14.57□□□□□ -0.08
SSA1YAL005C TRS130Q03660 1102 aa14.57□□□□□ -0.08
SSA1YAL005C GIR2Q03768 265 aaPredicted RBP14.57□□□□□ -0.08
SSA1YAL005C ECM7Q06200 448 aa14.57□□□□□ -0.08
SSA1YAL005C ZPS1Q12512 249 aa14.57□□□□□ -0.08
SSA1YAL005C ALD5P40047 520 aaKnown RBP14.56□□□□□ -0.08
SSA1YAL005C ASN1P49089 572 aaKnown RBP14.56□□□□□ -0.08
SSA1YAL005C HSH155P49955 971 aaKnown RBP14.56□□□□□ -0.08
SSA1YAL005C MUK1Q02866 612 aa14.56□□□□□ -0.08
SSA1YAL005C YKL023WP36103 277 aaKnown RBP14.56□□□□□ -0.08
SSA1YAL005C FIG4P42837 879 aa14.56□□□□□ -0.08
SSA1YAL005C ECM30Q06673 1274 aa14.56□□□□□ -0.08
SSA1YAL005C TOA1P32773 286 aa14.55□□□□□ -0.08
SSA1YAL005C SHE10P53075 577 aa14.55□□□□□ -0.08
SSA1YAL005C NPP2P39997 493 aa14.54□□□□□ -0.08
SSA1YAL005C SGM1P47166 707 aa14.54□□□□□ -0.08
SSA1YAL005C SUB1P54000 292 aaKnown RBP14.54□□□□□ -0.08
SSA1YAL005C SLX4Q12098 748 aa14.54□□□□□ -0.08
SSA1YAL005C COX4P04037 155 aa14.54□□□□□ -0.08
SSA1YAL005C SWI6P09959 803 aa14.54□□□□□ -0.08
SSA1YAL005C VMA1P17255 1071 aaKnown RBP14.54□□□□□ -0.08
SSA1YAL005C YPL034WQ03083 165 aa14.54□□□□□ -0.08
SSA1YAL005C VFA1P40080 203 aa14.53□□□□□ -0.08
SSA1YAL005C ATG36P46983 293 aa14.53□□□□□ -0.08
SSA1YAL005C HEM1P09950 548 aaPredicted RBP14.53□□□□□ -0.08
SSA1YAL005C PIN4P34217 668 aaKnown RBP RIP-Chip data14.53□□□□□ -0.08not detected
SSA1YAL005C YLR297WQ05899 129 aa14.53□□□□□ -0.08
SSA1YAL005C SHS1Q07657 551 aa14.53□□□□□ -0.08
SSA1YAL005C APL4Q12028 832 aa14.53□□□□□ -0.08
SSA1YAL005C POT1P27796 417 aaKnown RBP RIP-Chip data14.52□□□□□ -0.09not detected
SSA1YAL005C MRX3P38172 270 aa14.52□□□□□ -0.09
SSA1YAL005C SCD6P45978 349 aaKnown RBP RIP-Chip data14.52□□□□□ -0.09not detected
SSA1YAL005C UME1Q03010 460 aa14.52□□□□□ -0.09
SSA1YAL005C YLR287CQ05881 355 aa14.52□□□□□ -0.09
SSA1YAL005C TOM70P07213 617 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C XRS2P33301 854 aa14.51□□□□□ -0.09
SSA1YAL005C DRE2P36152 348 aa14.51□□□□□ -0.09
SSA1YAL005C UBP3Q01477 912 aaKnown RBP RIP-Chip data14.51□□□□□ -0.09 RIP-Chip
SSA1YAL005C DOT1Q04089 582 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C RRP6Q12149 733 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C ADE4P04046 510 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C RPL4AP10664 362 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C CYC8P14922 966 aa14.51□□□□□ -0.09
SSA1YAL005C TUP1P16649 713 aa14.51□□□□□ -0.09
SSA1YAL005C SKG6P32900 734 aaPredicted RBP14.51□□□□□ -0.09
SSA1YAL005C MMS4P38257 691 aa14.51□□□□□ -0.09
SSA1YAL005C RPL4BP49626 362 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C YNL115CP53925 644 aa14.51□□□□□ -0.09
SSA1YAL005C CSR1Q06705 408 aaKnown RBP14.51□□□□□ -0.09
SSA1YAL005C ATG9Q12142 997 aa14.51□□□□□ -0.09
SSA1YAL005C LDB19Q12502 818 aa14.51□□□□□ -0.09
SSA1YAL005C GLN3P18494 730 aa14.5□□□□□ -0.09
SSA1YAL005C IME1P21190 360 aa14.5□□□□□ -0.09
SSA1YAL005C ADE2P21264 571 aaKnown RBP14.5□□□□□ -0.09
SSA1YAL005C TAD1P53065 400 aa14.5□□□□□ -0.09
SSA1YAL005C HMI1Q12039 706 aa14.5□□□□□ -0.09
SSA1YAL005C TAO3P40468 2376 aa14.49□□□□□ -0.09
SSA1YAL005C COS5P47187 383 aa14.49□□□□□ -0.09
SSA1YAL005C YDL206WQ12424 762 aa14.49□□□□□ -0.09
SSA1YAL005C UBX7P38349 436 aa14.49□□□□□ -0.09
SSA1YAL005C PPR1P07272 904 aaPredicted RBP14.48□□□□□ -0.09
SSA1YAL005C SPO12P17123 173 aa14.48□□□□□ -0.09
SSA1YAL005C CDC11P32458 415 aa14.48□□□□□ -0.09
SSA1YAL005C MNR2P35724 969 aa14.48□□□□□ -0.09
SSA1YAL005C TBF1Q02457 562 aa14.48□□□□□ -0.09
SSA1YAL005C PLP2Q12017 286 aa14.48□□□□□ -0.09
SSA1YAL005C ULI1P43604 169 aa14.47□□□□□ -0.09
SSA1YAL005C FMP30Q02883 468 aa14.47□□□□□ -0.09
SSA1YAL005C PCD1Q12524 340 aa14.47□□□□□ -0.09
SSA1YAL005C NIP100P33420 868 aa14.47□□□□□ -0.09
SSA1YAL005C KIC1P38692 1080 aa14.47□□□□□ -0.09
SSA1YAL005C PRR1P28708 518 aa14.46□□□□□ -0.09
SSA1YAL005C SMC1P32908 1225 aa14.46□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms