RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C SFB2P53953 876 aa6.18□□□□□ -1.42
RPN8YOR261C YDR132CQ03900 495 aa6.18□□□□□ -1.42
RPN8YOR261C DUS4Q06063 367 aa6.18□□□□□ -1.42
RPN8YOR261C YPL277CQ08989 487 aa6.18□□□□□ -1.42
RPN8YOR261C RSP5P39940 809 aaKnown RBP6.17□□□□□ -1.42
RPN8YOR261C YKE2P52553 114 aa6.17□□□□□ -1.42
RPN8YOR261C TPO2P53283 614 aa6.17□□□□□ -1.42
RPN8YOR261C YOR352WQ08816 343 aa6.17□□□□□ -1.42
RPN8YOR261C CDC53Q12018 815 aaKnown RBP6.17□□□□□ -1.42
RPN8YOR261C SOD2P00447 233 aa6.16□□□□□ -1.42
RPN8YOR261C RPS13P05756 151 aaKnown RBP6.16□□□□□ -1.42
RPN8YOR261C CDC11P32458 415 aa6.16□□□□□ -1.42
RPN8YOR261C YBR284WP38150 797 aa6.16□□□□□ -1.42
RPN8YOR261C YBR238CP38330 731 aaKnown RBP6.16□□□□□ -1.42
RPN8YOR261C CCC2P38995 1004 aa6.16□□□□□ -1.42
RPN8YOR261C RIM8P53179 542 aa6.16□□□□□ -1.42
RPN8YOR261C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42 RIP-Chip
RPN8YOR261C GCN5Q03330 439 aa6.16□□□□□ -1.42
RPN8YOR261C TAF8Q03750 510 aa6.16□□□□□ -1.42
RPN8YOR261C YPR071WQ12346 211 aa6.16□□□□□ -1.42
RPN8YOR261C CDC6P09119 513 aa6.15□□□□□ -1.42
RPN8YOR261C SRP40P32583 406 aaPredicted RBP6.15□□□□□ -1.42
RPN8YOR261C YER158CP40095 573 aa6.15□□□□□ -1.42
RPN8YOR261C MND2P40577 368 aa6.15□□□□□ -1.42
RPN8YOR261C LCD1Q04377 747 aa6.15□□□□□ -1.42
RPN8YOR261C CDC48P25694 835 aaKnown RBP6.14□□□□□ -1.43
RPN8YOR261C ERT1P38140 529 aa6.14□□□□□ -1.43
RPN8YOR261C ZRG8P40021 1076 aa6.14□□□□□ -1.43
RPN8YOR261C TOK1P40310 691 aa6.14□□□□□ -1.43
RPN8YOR261C PBP1P53297 722 aaKnown RBP6.14□□□□□ -1.43
RPN8YOR261C RPN4Q03465 531 aa6.14□□□□□ -1.43
RPN8YOR261C CDA1Q06702 301 aa6.14□□□□□ -1.43
RPN8YOR261C PPM2Q08282 695 aa6.14□□□□□ -1.43
RPN8YOR261C CAN1P04817 590 aa6.13□□□□□ -1.43
RPN8YOR261C TOP3P13099 656 aa6.13□□□□□ -1.43
RPN8YOR261C RPC82P32349 654 aa6.13□□□□□ -1.43
RPN8YOR261C PET10P36139 283 aa6.13□□□□□ -1.43
RPN8YOR261C HUL4P40985 892 aa6.13□□□□□ -1.43
RPN8YOR261C MSD1P15179 658 aaKnown RBP6.12□□□□□ -1.43
RPN8YOR261C SCT1P32784 759 aa6.12□□□□□ -1.43
RPN8YOR261C BET3P36149 193 aa6.12□□□□□ -1.43
RPN8YOR261C GGA2P38817 585 aaKnown RBP6.12□□□□□ -1.43
RPN8YOR261C BUD6P41697 788 aa6.12□□□□□ -1.43
RPN8YOR261C CCM1P48237 864 aaPredicted RBP6.12□□□□□ -1.43
RPN8YOR261C YGR012WP53206 393 aa6.12□□□□□ -1.43
RPN8YOR261C GTF1P53260 183 aaPredicted RBP6.12□□□□□ -1.43
RPN8YOR261C TPO1Q07824 586 aa6.12□□□□□ -1.43
RPN8YOR261C GPB1Q08886 897 aa6.12□□□□□ -1.43
RPN8YOR261C HSF1P10961 833 aa6.11□□□□□ -1.43
RPN8YOR261C ENA1P13587 1091 aa6.11□□□□□ -1.43
RPN8YOR261C CDC20P26309 610 aa6.11□□□□□ -1.43
RPN8YOR261C SRP101P32916 621 aa6.11□□□□□ -1.43
RPN8YOR261C DOM34P33309 386 aa6.11□□□□□ -1.43
RPN8YOR261C REC104P33323 182 aa6.11□□□□□ -1.43
RPN8YOR261C YKL091CP33324 310 aaKnown RBP6.11□□□□□ -1.43
RPN8YOR261C TOD6P34219 525 aa6.11□□□□□ -1.43
RPN8YOR261C GCV2P49095 1034 aa6.11□□□□□ -1.43
RPN8YOR261C SPT20P50875 604 aa6.11□□□□□ -1.43
RPN8YOR261C RTA1P53047 317 aa6.11□□□□□ -1.43
RPN8YOR261C VPS62P53285 467 aa6.11□□□□□ -1.43
RPN8YOR261C ENA2Q01896 1091 aa6.11□□□□□ -1.43
RPN8YOR261C YPR196WQ06595 470 aa6.11□□□□□ -1.43
RPN8YOR261C RXT3Q07458 294 aa6.11□□□□□ -1.43
RPN8YOR261C ADY3Q07732 790 aa6.11□□□□□ -1.43
RPN8YOR261C YOR131CQ12486 218 aa6.11□□□□□ -1.43
RPN8YOR261C ENA5Q12691 1091 aa6.11□□□□□ -1.43
RPN8YOR261C UBP6P43593 499 aaKnown RBP6.1□□□□□ -1.43
RPN8YOR261C MET12P46151 657 aa6.1□□□□□ -1.43
RPN8YOR261C YDL124WQ07551 312 aaKnown RBP6.1□□□□□ -1.43
RPN8YOR261C ACK1Q07622 623 aaPredicted RBP6.1□□□□□ -1.43
RPN8YOR261C HMI1Q12039 706 aa6.1□□□□□ -1.43
RPN8YOR261C YTA7P40340 1379 aa6.09□□□□□ -1.43
RPN8YOR261C PRE10P21242 288 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RPN8YOR261C PBP2P38151 413 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
RPN8YOR261C POA1P38218 177 aa6.09□□□□□ -1.43
RPN8YOR261C CHZ1P40019 153 aaPredicted RBP6.09□□□□□ -1.43
RPN8YOR261C GAL11P19659 1081 aa6.08□□□□□ -1.44
RPN8YOR261C EMC1P25574 760 aa6.08□□□□□ -1.44
RPN8YOR261C CHA4P43634 648 aa6.08□□□□□ -1.44
RPN8YOR261C NOT3P06102 836 aaKnown RBP6.07□□□□□ -1.44
RPN8YOR261C YLR358CO13565 187 aa6.06□□□□□ -1.44
RPN8YOR261C HIS5P07172 385 aa6.06□□□□□ -1.44
RPN8YOR261C SPE1P08432 466 aa6.06□□□□□ -1.44
RPN8YOR261C RAI1P53063 387 aaKnown RBP6.06□□□□□ -1.44
RPN8YOR261C YAP6Q03935 383 aa6.06□□□□□ -1.44
RPN8YOR261C ENV7Q12003 364 aa6.06□□□□□ -1.44
RPN8YOR261C TOM70P07213 617 aaKnown RBP6.05□□□□□ -1.44
RPN8YOR261C CIT2P08679 460 aa6.05□□□□□ -1.44
RPN8YOR261C ERR1P0CX10 437 aa6.05□□□□□ -1.44
RPN8YOR261C ERR2P0CX11 437 aa6.05□□□□□ -1.44
RPN8YOR261C STE13P33894 931 aa6.05□□□□□ -1.44
RPN8YOR261C URM1P40554 99 aaPredicted RBP6.05□□□□□ -1.44
RPN8YOR261C PSP2P50109 593 aaKnown RBP6.05□□□□□ -1.44
RPN8YOR261C NOP12Q08208 459 aaKnown RBP6.05□□□□□ -1.44
RPN8YOR261C HDA1P53973 706 aa6.04□□□□□ -1.44
RPN8YOR261C YLR224WQ05947 369 aa6.04□□□□□ -1.44
RPN8YOR261C FBP1P09201 348 aa6.03□□□□□ -1.44
RPN8YOR261C TIM23P32897 222 aa6.03□□□□□ -1.44
RPN8YOR261C LST4P34239 828 aa6.03□□□□□ -1.44
RPN8YOR261C ATG19P35193 415 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms