RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C MTC1P47018 478 aaKnown RBP18.3■□□□□ 0.52
RPN8YOR261C FAP1P53971 965 aa17.61■□□□□ 0.41
RPN8YOR261C PRY3P47033 881 aa16.61■□□□□ 0.25
RPN8YOR261C DRS1P32892 752 aaKnown RBP16.03■□□□□ 0.16
RPN8YOR261C AAD16Q02895 342 aa16.03■□□□□ 0.16
RPN8YOR261C PRI1P10363 409 aa16.02■□□□□ 0.16
RPN8YOR261C YCK3P39962 524 aa15.81■□□□□ 0.12
RPN8YOR261C HAA1Q12753 694 aaKnown RBP15.48■□□□□ 0.07
RPN8YOR261C ISW2Q08773 1120 aa15.33■□□□□ 0.04
RPN8YOR261C RPG1P38249 964 aaKnown RBP15.27■□□□□ 0.04
RPN8YOR261C TSR3Q12094 313 aaKnown RBP15.11■□□□□ 0.01
RPN8YOR261C MRPL32P25348 183 aa14.44□□□□□ -0.1
RPN8YOR261C DIP2Q12220 943 aaPredicted RBP14.44□□□□□ -0.1
RPN8YOR261C RSE1Q04693 1361 aaKnown RBP14.22□□□□□ -0.13
RPN8YOR261C YGL015CP33199 130 aa14.14□□□□□ -0.15
RPN8YOR261C RPL17AP05740 184 aaKnown RBP13.87□□□□□ -0.19
RPN8YOR261C RPL17BP46990 184 aaKnown RBP13.87□□□□□ -0.19
RPN8YOR261C REB1P21538 810 aa13.86□□□□□ -0.19
RPN8YOR261C AVT3P36062 692 aa13.66□□□□□ -0.22
RPN8YOR261C CDC27P38042 758 aa13.65□□□□□ -0.22
RPN8YOR261C BUD31P25337 157 aaPredicted RBP13.45□□□□□ -0.26
RPN8YOR261C YKR023WP36119 530 aaKnown RBP13.35□□□□□ -0.27
RPN8YOR261C MAP2P38174 421 aaKnown RBP13.31□□□□□ -0.28
RPN8YOR261C UBP10P53874 792 aaPredicted RBP13.29□□□□□ -0.28
RPN8YOR261C SPT21P35209 758 aa13.25□□□□□ -0.29
RPN8YOR261C BFR2Q06631 534 aaKnown RBP13.24□□□□□ -0.29
RPN8YOR261C DCD1P06773 312 aa13.08□□□□□ -0.32
RPN8YOR261C HOP09932 586 aa13.07□□□□□ -0.32
RPN8YOR261C TFC8Q12308 588 aa13.04□□□□□ -0.32
RPN8YOR261C SCY1P53009 804 aa12.83□□□□□ -0.36
RPN8YOR261C TGL3P40308 642 aa12.72□□□□□ -0.37
RPN8YOR261C TIF4632P39936 914 aaKnown RBP12.7□□□□□ -0.38
RPN8YOR261C SLX5P32828 619 aaKnown RBP12.69□□□□□ -0.38
RPN8YOR261C SIS1P25294 352 aaKnown RBP12.66□□□□□ -0.38
RPN8YOR261C BCH2P36122 765 aa12.59□□□□□ -0.39
RPN8YOR261C UBP9P39967 754 aa12.57□□□□□ -0.4
RPN8YOR261C RIM101P33400 625 aa12.54□□□□□ -0.4
RPN8YOR261C TFA1P36100 482 aa12.33□□□□□ -0.44
RPN8YOR261C EPS1P40557 701 aa12.18□□□□□ -0.46
RPN8YOR261C BDF1P35817 686 aa12.17□□□□□ -0.46
RPN8YOR261C OXP1P28273 1286 aa12.12□□□□□ -0.47
RPN8YOR261C MST1P07236 462 aa12.1□□□□□ -0.47
RPN8YOR261C YBL029C-AQ3E756 94 aa12.08□□□□□ -0.48
RPN8YOR261C YOR238WQ08634 303 aa11.96□□□□□ -0.49
RPN8YOR261C VNX1P42839 908 aa11.9□□□□□ -0.5
RPN8YOR261C PTP3P40048 928 aa11.88□□□□□ -0.51
RPN8YOR261C NSR1P27476 414 aaKnown RBP RIP-Chip data11.84□□□□□ -0.51not detected
RPN8YOR261C YIL055CP40523 627 aaKnown RBP11.82□□□□□ -0.52
RPN8YOR261C SPP1Q03012 353 aa11.74□□□□□ -0.53
RPN8YOR261C YAP5P40574 245 aa11.73□□□□□ -0.53
RPN8YOR261C WSC3Q12215 556 aa11.71□□□□□ -0.53
RPN8YOR261C RSM7P47150 247 aa11.7□□□□□ -0.54
RPN8YOR261C AI2P03876 854 aa11.69□□□□□ -0.54
RPN8YOR261C BBC1P47068 1157 aa11.69□□□□□ -0.54
RPN8YOR261C AIR2Q12476 344 aaKnown RBP11.65□□□□□ -0.54
RPN8YOR261C FKH1P40466 484 aa11.58□□□□□ -0.56
RPN8YOR261C TIF11P38912 153 aaKnown RBP11.57□□□□□ -0.56
RPN8YOR261C YAH1Q12184 172 aaKnown RBP11.56□□□□□ -0.56
RPN8YOR261C YJL171CP46992 396 aa11.49□□□□□ -0.57
RPN8YOR261C GTT3P39996 337 aa11.47□□□□□ -0.57
RPN8YOR261C LDB19Q12502 818 aa11.42□□□□□ -0.58
RPN8YOR261C PIB1Q06651 286 aa11.4□□□□□ -0.58
RPN8YOR261C IOC2Q12072 812 aa11.4□□□□□ -0.58
RPN8YOR261C ULI1P43604 169 aa11.37□□□□□ -0.59
RPN8YOR261C YLR271WQ06152 274 aa11.36□□□□□ -0.59
RPN8YOR261C PSD2P53037 1138 aaKnown RBP11.3□□□□□ -0.6
RPN8YOR261C BMT6Q12291 365 aa11.29□□□□□ -0.6
RPN8YOR261C MRM1P25270 412 aa11.22□□□□□ -0.61
RPN8YOR261C MSB4Q12317 492 aa11.17□□□□□ -0.62
RPN8YOR261C SET4P42948 560 aa11.12□□□□□ -0.63
RPN8YOR261C YOL036WQ08206 761 aa11.12□□□□□ -0.63
RPN8YOR261C RTG1P32607 177 aa11.11□□□□□ -0.63
RPN8YOR261C EAP1P36041 632 aaKnown RBP11.11□□□□□ -0.63
RPN8YOR261C TRP5P00931 707 aaKnown RBP11.1□□□□□ -0.63
RPN8YOR261C NCR1Q12200 1170 aa11.05□□□□□ -0.64
RPN8YOR261C VPS29P38759 282 aa11.02□□□□□ -0.65
RPN8YOR261C DBP1P24784 617 aaKnown RBP11□□□□□ -0.65
RPN8YOR261C YFR006WP43590 535 aa10.99□□□□□ -0.65
RPN8YOR261C YMR1P47147 688 aaKnown RBP RIP-Chip data10.99□□□□□ -0.65not detected
RPN8YOR261C YNL035CP53962 389 aaKnown RBP10.98□□□□□ -0.65
RPN8YOR261C VMA1P17255 1071 aaKnown RBP10.95□□□□□ -0.66
RPN8YOR261C SEC61P32915 480 aa10.95□□□□□ -0.66
RPN8YOR261C STS1P38637 319 aa10.94□□□□□ -0.66
RPN8YOR261C CST9Q06032 482 aa10.93□□□□□ -0.66
RPN8YOR261C SAM3Q08986 587 aa10.91□□□□□ -0.66
RPN8YOR261C SSP1P38871 571 aa10.9□□□□□ -0.66
RPN8YOR261C RTG3P38165 486 aa10.87□□□□□ -0.67
RPN8YOR261C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.86□□□□□ -0.67not detected
RPN8YOR261C DAN4P47179 1161 aa10.83□□□□□ -0.68
RPN8YOR261C SAP30P38429 201 aa10.8□□□□□ -0.68
RPN8YOR261C RCR1P38212 213 aa10.79□□□□□ -0.68
RPN8YOR261C TFG1P41895 735 aaPredicted RBP10.76□□□□□ -0.69
RPN8YOR261C MGA2P40578 1113 aa10.74□□□□□ -0.69
RPN8YOR261C BCK2P33306 851 aa10.72□□□□□ -0.69
RPN8YOR261C JIP4Q03361 876 aa10.72□□□□□ -0.69
RPN8YOR261C YDL129WQ07555 291 aa10.7□□□□□ -0.7
RPN8YOR261C GYP5Q12344 894 aa10.69□□□□□ -0.7
RPN8YOR261C CHL1P22516 861 aaPredicted RBP10.67□□□□□ -0.7
RPN8YOR261C DCW1P36091 449 aa10.64□□□□□ -0.71
RPN8YOR261C ABP1P15891 592 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms