RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	ERT1	P38140	529 aa		5.14	□□□□□ -1.59
IOC4	YMR044W	RIM4	P38741	713 aa		5.14	□□□□□ -1.59
IOC4	YMR044W	NMD3	P38861	518 aa	Known RBP	5.14	□□□□□ -1.59
IOC4	YMR044W	MET13	P53128	600 aa		5.14	□□□□□ -1.59
IOC4	YMR044W	YPL260W	Q08977	551 aa		5.14	□□□□□ -1.59
IOC4	YMR044W	YLL054C	Q12244	843 aa		5.14	□□□□□ -1.59
IOC4	YMR044W	CDC9	P04819	755 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	SRD1	P09007	221 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	SSH4	P32343	579 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	PPH3	P32345	308 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	PRP19	P32523	503 aa	Known RBP	5.13	□□□□□ -1.59
IOC4	YMR044W	HSP78	P33416	811 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	YEL1	P34225	687 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	HSE1	P38753	452 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	SIT1	P39980	628 aa		5.13	□□□□□ -1.59
IOC4	YMR044W	DOT1	Q04089	582 aa	Known RBP	5.13	□□□□□ -1.59
IOC4	YMR044W	RRP6	Q12149	733 aa	Known RBP	5.13	□□□□□ -1.59
IOC4	YMR044W	ADE8	P04161	214 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	AFR1	P33304	620 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	NIC96	P34077	839 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	YRO2	P38079	344 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	DUG1	P43616	481 aa	Known RBP	5.12	□□□□□ -1.59
IOC4	YMR044W	NCE103	P53615	221 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	BUL2	Q03758	920 aa	Known RBP	5.12	□□□□□ -1.59
IOC4	YMR044W	YLR257W	Q06146	321 aa	Known RBP	5.12	□□□□□ -1.59
IOC4	YMR044W	YOR223W	Q12015	292 aa		5.12	□□□□□ -1.59
IOC4	YMR044W	YTM1	Q12024	460 aa	Predicted RBP	5.12	□□□□□ -1.59
IOC4	YMR044W	SFL1	P20134	766 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	AEP2	P22136	580 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	YKL133C	P36066	463 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	CKB2	P38930	258 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	YFL054C	P43549	646 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	PBP1	P53297	722 aa	Known RBP	5.11	□□□□□ -1.59
IOC4	YMR044W	PSR2	Q07949	397 aa		5.11	□□□□□ -1.59
IOC4	YMR044W	NPP1	P25353	742 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	GFD2	P25370	566 aa	Known RBP	5.1	□□□□□ -1.59
IOC4	YMR044W	PCL2	P25693	308 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	CDC12	P32468	407 aa	Known RBP	5.1	□□□□□ -1.59
IOC4	YMR044W	YKL151C	P36059	337 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	YJR096W	P47137	282 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	TAN1	P53072	289 aa	Predicted RBP	5.1	□□□□□ -1.59
IOC4	YMR044W	PAP2	P53632	584 aa	Known RBP	5.1	□□□□□ -1.59
IOC4	YMR044W	HRQ1	Q05549	1077 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	GUD1	Q07729	489 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	NHA1	Q99271	985 aa		5.1	□□□□□ -1.59
IOC4	YMR044W	GAR1	P28007	205 aa	Known RBP	5.09	□□□□□ -1.59
IOC4	YMR044W	SLA2	P33338	968 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	SPC29	P33419	253 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	TOK1	P40310	691 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	YJL045W	P47052	634 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	DSE4	P53753	1117 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	LCD1	Q04377	747 aa		5.09	□□□□□ -1.59
IOC4	YMR044W	INH1	P01097	85 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	KCC4	P25389	1037 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	PRO1	P32264	428 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	STO1	P34160	861 aa	Known RBP	5.08	□□□□□ -1.6
IOC4	YMR044W	MNN4	P36044	1178 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	GPT2	P36148	743 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	YAP1801	P38856	637 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	OAF1	P39720	1047 aa	Predicted RBP	5.08	□□□□□ -1.6
IOC4	YMR044W	TAF1	P46677	1066 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	MDM1	Q01846	1127 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	SRP1	Q02821	542 aa	Known RBP	5.08	□□□□□ -1.6
IOC4	YMR044W	COG8	Q04632	607 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	MLC2	Q06580	163 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	ERP4	Q12450	207 aa		5.08	□□□□□ -1.6
IOC4	YMR044W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	RIP-Chip
IOC4	YMR044W	SMY2	P32909	740 aa	Known RBP	5.07	□□□□□ -1.6
IOC4	YMR044W	NNK1	P36003	928 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	JNM1	P36224	373 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	EXO84	P38261	753 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	RRM3	P38766	723 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	GZF3	P42944	551 aa	Known RBP	5.07	□□□□□ -1.6
IOC4	YMR044W	CAF16	P43569	289 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	GYP8	P43570	497 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	NIT2	P47016	307 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	JJJ3	P47138	172 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	SNP1	Q00916	300 aa	Predicted RBP	5.07	□□□□□ -1.6
IOC4	YMR044W	ACM1	Q08981	209 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	RMP1	Q12530	201 aa		5.07	□□□□□ -1.6
IOC4	YMR044W	MPH2	P0CD99	609 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	MDJ1	P35191	511 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	UGA2	P38067	497 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	RPN3	P40016	523 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	HIS6	P40545	261 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	TY1A-NL1	Q12391	440 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	DBF20	P32328	564 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	REC104	P33323	182 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	YBR238C	P38330	731 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	PCM1	P38628	557 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	YHL041W	P38730	149 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	GPP2	P40106	250 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	RSC8	P43609	557 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	MNN11	P46985	422 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	DAM1	P53267	343 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	YGR283C	P53336	341 aa	Predicted RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	HOS3	Q02959	697 aa	Known RBP	5.06	□□□□□ -1.6
IOC4	YMR044W	TPP1	Q03796	238 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	PHM6	Q05637	104 aa		5.06	□□□□□ -1.6
IOC4	YMR044W	RSC3	Q06639	885 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms