RNA–Protein interactions for RNA: YDL030W

PRP9, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP9, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP9YDL030W NPP2P39997 493 aa6.12□□□□□ -1.43
PRP9YDL030W YER158CP40095 573 aa6.12□□□□□ -1.43
PRP9YDL030W UTP8P53276 713 aaKnown RBP6.12□□□□□ -1.43
PRP9YDL030W SFB2P53953 876 aa6.12□□□□□ -1.43
PRP9YDL030W RPC82P32349 654 aa6.11□□□□□ -1.43
PRP9YDL030W CDC11P32458 415 aa6.11□□□□□ -1.43
PRP9YDL030W SRP101P32916 621 aa6.11□□□□□ -1.43
PRP9YDL030W FLR1P38124 548 aa6.11□□□□□ -1.43
PRP9YDL030W PSP2P50109 593 aaKnown RBP6.11□□□□□ -1.43
PRP9YDL030W TPO1Q07824 586 aa6.11□□□□□ -1.43
PRP9YDL030W CDC6P09119 513 aa6.1□□□□□ -1.43
PRP9YDL030W HSF1P10961 833 aa6.1□□□□□ -1.43
PRP9YDL030W EMC1P25574 760 aa6.1□□□□□ -1.43
PRP9YDL030W ARE1P25628 610 aa6.1□□□□□ -1.43
PRP9YDL030W TSL1P38427 1098 aaKnown RBP6.1□□□□□ -1.43
PRP9YDL030W TIM54P47045 478 aa6.1□□□□□ -1.43
PRP9YDL030W VPS62P53285 467 aa6.1□□□□□ -1.43
PRP9YDL030W HMI1Q12039 706 aa6.1□□□□□ -1.43
PRP9YDL030W RPP2AP05319 106 aaKnown RBP6.1□□□□□ -1.43
PRP9YDL030W CDC48P25694 835 aaKnown RBP6.1□□□□□ -1.43
PRP9YDL030W HBS1P32769 611 aaKnown RBP6.1□□□□□ -1.43
PRP9YDL030W YKL222CP35995 705 aa6.1□□□□□ -1.43
PRP9YDL030W CCC2P38995 1004 aa6.1□□□□□ -1.43
PRP9YDL030W NNF1P47149 201 aa6.1□□□□□ -1.43
PRP9YDL030W YAP6Q03935 383 aa6.1□□□□□ -1.43
PRP9YDL030W UBX5Q06682 500 aa6.1□□□□□ -1.43
PRP9YDL030W CDA1Q06702 301 aa6.1□□□□□ -1.43
PRP9YDL030W NPP1P25353 742 aa6.09□□□□□ -1.43
PRP9YDL030W MET12P46151 657 aa6.09□□□□□ -1.43
PRP9YDL030W CLU1Q03690 1277 aaKnown RBP6.09□□□□□ -1.43
PRP9YDL030W NOP12Q08208 459 aaKnown RBP6.09□□□□□ -1.43
PRP9YDL030W HSP60P19882 572 aaKnown RBP6.08□□□□□ -1.44
PRP9YDL030W YCR015CP25616 317 aa6.08□□□□□ -1.44
PRP9YDL030W GIP4P39732 760 aa6.08□□□□□ -1.44
PRP9YDL030W TAF1P46677 1066 aa6.08□□□□□ -1.44
PRP9YDL030W YGR125WP53273 1036 aa6.08□□□□□ -1.44
PRP9YDL030W LCD1Q04377 747 aa6.08□□□□□ -1.44
PRP9YDL030W ADY3Q07732 790 aa6.08□□□□□ -1.44
PRP9YDL030W AFR1P33304 620 aa6.07□□□□□ -1.44
PRP9YDL030W CCM1P48237 864 aaPredicted RBP6.07□□□□□ -1.44
PRP9YDL030W HIS5P07172 385 aa6.06□□□□□ -1.44
PRP9YDL030W SPE1P08432 466 aa6.06□□□□□ -1.44
PRP9YDL030W YBR284WP38150 797 aa6.06□□□□□ -1.44
PRP9YDL030W MPT5P39016 859 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
PRP9YDL030W YLR224WQ05947 369 aa6.06□□□□□ -1.44
PRP9YDL030W YPR071WQ12346 211 aa6.06□□□□□ -1.44
PRP9YDL030W ATG19P35193 415 aa6.06□□□□□ -1.44
PRP9YDL030W CIT1P00890 479 aa6.05□□□□□ -1.44
PRP9YDL030W YBR238CP38330 731 aaKnown RBP6.05□□□□□ -1.44
PRP9YDL030W HUL4P40985 892 aa6.05□□□□□ -1.44
PRP9YDL030W YKE2P52553 114 aa6.05□□□□□ -1.44
PRP9YDL030W RAI1P53063 387 aaKnown RBP6.05□□□□□ -1.44
PRP9YDL030W HUL5P53119 910 aa6.05□□□□□ -1.44
PRP9YDL030W TMA10Q06177 86 aa6.05□□□□□ -1.44
PRP9YDL030W HBN1Q96VH4 193 aa6.05□□□□□ -1.44
PRP9YDL030W STE11P23561 717 aa6.04□□□□□ -1.44
PRP9YDL030W REC104P33323 182 aa6.04□□□□□ -1.44
PRP9YDL030W LST4P34239 828 aa6.04□□□□□ -1.44
PRP9YDL030W TOK1P40310 691 aa6.04□□□□□ -1.44
PRP9YDL030W BUL2Q03758 920 aaKnown RBP6.04□□□□□ -1.44
PRP9YDL030W FLC1Q08967 793 aa6.04□□□□□ -1.44
PRP9YDL030W NOT3P06102 836 aaKnown RBP6.03□□□□□ -1.44
PRP9YDL030W SHM2P37291 469 aaKnown RBP6.03□□□□□ -1.44
PRP9YDL030W ERT1P38140 529 aa6.03□□□□□ -1.44
PRP9YDL030W PLB1P39105 664 aa6.03□□□□□ -1.44
PRP9YDL030W MCM6P53091 1017 aaKnown RBP6.03□□□□□ -1.44
PRP9YDL030W YDL124WQ07551 312 aaKnown RBP6.03□□□□□ -1.44
PRP9YDL030W CDC53Q12018 815 aaKnown RBP6.03□□□□□ -1.44
PRP9YDL030W STI1P15705 589 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
PRP9YDL030W CTS1P29029 562 aa6.02□□□□□ -1.45
PRP9YDL030W PET10P36139 283 aa6.02□□□□□ -1.45
PRP9YDL030W YHR020WP38708 688 aaKnown RBP6.02□□□□□ -1.45
PRP9YDL030W CHA4P43634 648 aa6.02□□□□□ -1.45
PRP9YDL030W MNN10P50108 393 aaKnown RBP6.02□□□□□ -1.45
PRP9YDL030W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
PRP9YDL030W VPS30Q02948 557 aa6.02□□□□□ -1.45
PRP9YDL030W BDF2Q07442 638 aa6.02□□□□□ -1.45
PRP9YDL030W MSD1P15179 658 aaKnown RBP6.01□□□□□ -1.45
PRP9YDL030W RFA1P22336 621 aaKnown RBP6.01□□□□□ -1.45
PRP9YDL030W NSE3Q05541 303 aa6.01□□□□□ -1.45
PRP9YDL030W YOL098CQ12496 1037 aa6.01□□□□□ -1.45
PRP9YDL030W SPA2P23201 1466 aaKnown RBP6.01□□□□□ -1.45
PRP9YDL030W TAF8Q03750 510 aa6.01□□□□□ -1.45
PRP9YDL030W STE13P33894 931 aa6□□□□□ -1.45
PRP9YDL030W GGA2P38817 585 aaKnown RBP6□□□□□ -1.45
PRP9YDL030W URM1P40554 99 aaPredicted RBP6□□□□□ -1.45
PRP9YDL030W IOC3P43596 787 aa6□□□□□ -1.45
PRP9YDL030W WHI4Q07655 649 aaKnown RBP6□□□□□ -1.45
PRP9YDL030W TOP3P13099 656 aa5.99□□□□□ -1.45
PRP9YDL030W RSP5P39940 809 aaKnown RBP5.99□□□□□ -1.45
PRP9YDL030W YOR131CQ12486 218 aa5.99□□□□□ -1.45
PRP9YDL030W TOM70P07213 617 aaKnown RBP5.98□□□□□ -1.45
PRP9YDL030W SRP40P32583 406 aaPredicted RBP5.98□□□□□ -1.45
PRP9YDL030W UBP6P43593 499 aaKnown RBP5.98□□□□□ -1.45
PRP9YDL030W GAL11P19659 1081 aa5.97□□□□□ -1.45
PRP9YDL030W CEP3P40969 608 aa5.97□□□□□ -1.45
PRP9YDL030W NCS6P53088 359 aa5.97□□□□□ -1.45
PRP9YDL030W NPC2Q12408 173 aa5.97□□□□□ -1.45
PRP9YDL030W KCS1Q12494 1050 aa5.97□□□□□ -1.45
PRP9YDL030W SGS1P35187 1447 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms