RNA–Protein interactions for RNA: YCL050C

APA1, Transcript of AP4A phosphorylase, yeast

Gene APA1, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APA1	YCL050C	UBX5	Q06682	500 aa		5.82	□□□□□ -1.48
APA1	YCL050C	RPC82	P32349	654 aa		5.81	□□□□□ -1.48
APA1	YCL050C	SIT1	P39980	628 aa		5.81	□□□□□ -1.48
APA1	YCL050C	GYP7	P48365	746 aa		5.81	□□□□□ -1.48
APA1	YCL050C	GCV2	P49095	1034 aa		5.81	□□□□□ -1.48
APA1	YCL050C	SFB2	P53953	876 aa		5.81	□□□□□ -1.48
APA1	YCL050C	DUS4	Q06063	367 aa		5.81	□□□□□ -1.48
APA1	YCL050C	ACK1	Q07622	623 aa	Predicted RBP	5.81	□□□□□ -1.48
APA1	YCL050C	YLR358C	O13565	187 aa		5.8	□□□□□ -1.48
APA1	YCL050C	HSF1	P10961	833 aa		5.8	□□□□□ -1.48
APA1	YCL050C	CDC48	P25694	835 aa	Known RBP	5.8	□□□□□ -1.48
APA1	YCL050C	HBS1	P32769	611 aa	Known RBP	5.8	□□□□□ -1.48
APA1	YCL050C	YKR078W	P36158	585 aa	Known RBP	5.8	□□□□□ -1.48
APA1	YCL050C	YBR284W	P38150	797 aa		5.8	□□□□□ -1.48
APA1	YCL050C	NPP2	P39997	493 aa		5.8	□□□□□ -1.48
APA1	YCL050C	CDC53	Q12018	815 aa	Known RBP	5.8	□□□□□ -1.48
APA1	YCL050C	RPP2A	P05319	106 aa	Known RBP	5.79	□□□□□ -1.48
APA1	YCL050C	TSL1	P38427	1098 aa	Known RBP	5.79	□□□□□ -1.48
APA1	YCL050C	HUL4	P40985	892 aa		5.79	□□□□□ -1.48
APA1	YCL050C	HUL5	P53119	910 aa		5.79	□□□□□ -1.48
APA1	YCL050C	LCD1	Q04377	747 aa		5.79	□□□□□ -1.48
APA1	YCL050C	TPO1	Q07824	586 aa		5.79	□□□□□ -1.48
APA1	YCL050C	CIT1	P00890	479 aa		5.78	□□□□□ -1.48
APA1	YCL050C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
APA1	YCL050C	NPP1	P25353	742 aa		5.78	□□□□□ -1.48
APA1	YCL050C	EMC1	P25574	760 aa		5.78	□□□□□ -1.48
APA1	YCL050C	DOM34	P33309	386 aa		5.78	□□□□□ -1.48
APA1	YCL050C	CCM1	P48237	864 aa	Predicted RBP	5.78	□□□□□ -1.48
APA1	YCL050C	YDL124W	Q07551	312 aa	Known RBP	5.78	□□□□□ -1.48
APA1	YCL050C	FLC1	Q08967	793 aa		5.78	□□□□□ -1.48
APA1	YCL050C	YPR071W	Q12346	211 aa		5.78	□□□□□ -1.48
APA1	YCL050C	YOL098C	Q12496	1037 aa		5.78	□□□□□ -1.48
APA1	YCL050C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
APA1	YCL050C	CDC20	P26309	610 aa		5.77	□□□□□ -1.49
APA1	YCL050C	SRP40	P32583	406 aa	Predicted RBP	5.77	□□□□□ -1.49
APA1	YCL050C	YAP6	Q03935	383 aa		5.77	□□□□□ -1.49
APA1	YCL050C	CDA1	Q06702	301 aa		5.77	□□□□□ -1.49
APA1	YCL050C	ESC8	Q08119	714 aa		5.77	□□□□□ -1.49
APA1	YCL050C	HMI1	Q12039	706 aa		5.77	□□□□□ -1.49
APA1	YCL050C	YOR131C	Q12486	218 aa		5.77	□□□□□ -1.49
APA1	YCL050C	SPE1	P08432	466 aa		5.76	□□□□□ -1.49
APA1	YCL050C	REC104	P33323	182 aa		5.76	□□□□□ -1.49
APA1	YCL050C	MET12	P46151	657 aa		5.76	□□□□□ -1.49
APA1	YCL050C	VPS62	P53285	467 aa		5.76	□□□□□ -1.49
APA1	YCL050C	VPS30	Q02948	557 aa		5.76	□□□□□ -1.49
APA1	YCL050C	NSE3	Q05541	303 aa		5.76	□□□□□ -1.49
APA1	YCL050C	BDF2	Q07442	638 aa		5.76	□□□□□ -1.49
APA1	YCL050C	NOP12	Q08208	459 aa	Known RBP	5.76	□□□□□ -1.49
APA1	YCL050C	HBN1	Q96VH4	193 aa		5.76	□□□□□ -1.49
APA1	YCL050C	CDC6	P09119	513 aa		5.75	□□□□□ -1.49
APA1	YCL050C	RFA1	P22336	621 aa	Known RBP	5.75	□□□□□ -1.49
APA1	YCL050C	AFR1	P33304	620 aa		5.75	□□□□□ -1.49
APA1	YCL050C	YKL222C	P35995	705 aa		5.75	□□□□□ -1.49
APA1	YCL050C	FLR1	P38124	548 aa		5.75	□□□□□ -1.49
APA1	YCL050C	TOK1	P40310	691 aa		5.75	□□□□□ -1.49
APA1	YCL050C	RAI1	P53063	387 aa	Known RBP	5.75	□□□□□ -1.49
APA1	YCL050C	ADY3	Q07732	790 aa		5.75	□□□□□ -1.49
APA1	YCL050C	NOT3	P06102	836 aa	Known RBP	5.74	□□□□□ -1.49
APA1	YCL050C	HIS5	P07172	385 aa		5.74	□□□□□ -1.49
APA1	YCL050C	ATG19	P35193	415 aa		5.74	□□□□□ -1.49
APA1	YCL050C	PET10	P36139	283 aa		5.74	□□□□□ -1.49
APA1	YCL050C	ERT1	P38140	529 aa		5.74	□□□□□ -1.49
APA1	YCL050C	YHR020W	P38708	688 aa	Known RBP	5.74	□□□□□ -1.49
APA1	YCL050C	GGA2	P38817	585 aa	Known RBP	5.74	□□□□□ -1.49
APA1	YCL050C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
APA1	YCL050C	CLU1	Q03690	1277 aa	Known RBP	5.74	□□□□□ -1.49
APA1	YCL050C	TOM70	P07213	617 aa	Known RBP	5.73	□□□□□ -1.49
APA1	YCL050C	MSD1	P15179	658 aa	Known RBP	5.73	□□□□□ -1.49
APA1	YCL050C	GAL11	P19659	1081 aa		5.73	□□□□□ -1.49
APA1	YCL050C	YBR238C	P38330	731 aa	Known RBP	5.73	□□□□□ -1.49
APA1	YCL050C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
APA1	YCL050C	RSP5	P39940	809 aa	Known RBP	5.73	□□□□□ -1.49
APA1	YCL050C	IOC3	P43596	787 aa		5.73	□□□□□ -1.49
APA1	YCL050C	YLR224W	Q05947	369 aa		5.73	□□□□□ -1.49
APA1	YCL050C	TMA10	Q06177	86 aa		5.73	□□□□□ -1.49
APA1	YCL050C	YKL091C	P33324	310 aa	Known RBP	5.72	□□□□□ -1.49
APA1	YCL050C	GIP4	P39732	760 aa		5.72	□□□□□ -1.49
APA1	YCL050C	YKE2	P52553	114 aa		5.72	□□□□□ -1.49
APA1	YCL050C	TAF8	Q03750	510 aa		5.72	□□□□□ -1.49
APA1	YCL050C	BUL2	Q03758	920 aa	Known RBP	5.72	□□□□□ -1.49
APA1	YCL050C	TOP3	P13099	656 aa		5.71	□□□□□ -1.5
APA1	YCL050C	OCA5	P38738	679 aa		5.71	□□□□□ -1.5
APA1	YCL050C	PLB1	P39105	664 aa		5.71	□□□□□ -1.5
APA1	YCL050C	TAF1	P46677	1066 aa		5.71	□□□□□ -1.5
APA1	YCL050C	MCM6	P53091	1017 aa	Known RBP	5.71	□□□□□ -1.5
APA1	YCL050C	CAN1	P04817	590 aa		5.7	□□□□□ -1.5
APA1	YCL050C	YCR015C	P25616	317 aa		5.7	□□□□□ -1.5
APA1	YCL050C	STE13	P33894	931 aa		5.7	□□□□□ -1.5
APA1	YCL050C	LST4	P34239	828 aa		5.7	□□□□□ -1.5
APA1	YCL050C	CEP3	P40969	608 aa		5.7	□□□□□ -1.5
APA1	YCL050C	UBP6	P43593	499 aa	Known RBP	5.7	□□□□□ -1.5
APA1	YCL050C	NIT3	P49954	291 aa		5.7	□□□□□ -1.5
APA1	YCL050C	RPS9A	O13516	197 aa	Known RBP	5.69	□□□□□ -1.5
APA1	YCL050C	STE11	P23561	717 aa		5.69	□□□□□ -1.5
APA1	YCL050C	SHM2	P37291	469 aa	Known RBP	5.69	□□□□□ -1.5
APA1	YCL050C	CHA4	P43634	648 aa		5.69	□□□□□ -1.5
APA1	YCL050C	MNN10	P50108	393 aa	Known RBP	5.69	□□□□□ -1.5
APA1	YCL050C	WHI4	Q07655	649 aa	Known RBP	5.69	□□□□□ -1.5
APA1	YCL050C	MPH2	P0CD99	609 aa		5.68	□□□□□ -1.5
APA1	YCL050C	CTS1	P29029	562 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms