RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeastyeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAN1YIR006C LAM1P38851 1228 aa5□□□□□ -1.61
PAN1YIR006C VPS53P47061 822 aa5□□□□□ -1.61
PAN1YIR006C MCM16Q12262 181 aa5□□□□□ -1.61
PAN1YIR006C TUS1Q06412 1307 aa5□□□□□ -1.61
PAN1YIR006C RRP5Q05022 1729 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C DCD1P06773 312 aa5□□□□□ -1.61
PAN1YIR006C MAK31P23059 88 aa5□□□□□ -1.61
PAN1YIR006C DBF4P32325 704 aa5□□□□□ -1.61
PAN1YIR006C SWI3P32591 825 aa5□□□□□ -1.61
PAN1YIR006C HEL1P36113 551 aa5□□□□□ -1.61
PAN1YIR006C TOM71P38825 639 aaKnown RBP5□□□□□ -1.61
PAN1YIR006C APL6P46682 809 aa5□□□□□ -1.61
PAN1YIR006C TFC8Q12308 588 aa5□□□□□ -1.61
PAN1YIR006C RIM101P33400 625 aa4.99□□□□□ -1.61
PAN1YIR006C YFH7P43591 353 aa4.99□□□□□ -1.61
PAN1YIR006C YML6P51998 286 aa4.99□□□□□ -1.61
PAN1YIR006C PCL10P53124 433 aa4.99□□□□□ -1.61
PAN1YIR006C ALF1P53904 254 aa4.99□□□□□ -1.61
PAN1YIR006C PXA1P41909 870 aa4.99□□□□□ -1.61
PAN1YIR006C RPN11P43588 306 aaKnown RBP4.99□□□□□ -1.61
PAN1YIR006C PGA2P53903 129 aa4.99□□□□□ -1.61
PAN1YIR006C KTR5P53966 522 aaPredicted RBP4.99□□□□□ -1.61
PAN1YIR006C ATG17Q06410 417 aa4.99□□□□□ -1.61
PAN1YIR006C MED1Q12321 566 aa4.99□□□□□ -1.61
PAN1YIR006C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
PAN1YIR006C SPO12P17123 173 aa4.99□□□□□ -1.61
PAN1YIR006C TFC3P34111 1160 aa4.99□□□□□ -1.61
PAN1YIR006C NMD3P38861 518 aaKnown RBP4.99□□□□□ -1.61
PAN1YIR006C SBE2P42223 864 aaKnown RBP4.99□□□□□ -1.61
PAN1YIR006C SCD6P45978 349 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
PAN1YIR006C VTC4P47075 721 aa4.99□□□□□ -1.61
PAN1YIR006C MAL13P53338 473 aa4.99□□□□□ -1.61
PAN1YIR006C UBX4P54730 416 aa4.99□□□□□ -1.61
PAN1YIR006C YMR102CQ03177 834 aa4.99□□□□□ -1.61
PAN1YIR006C GYL1Q04322 720 aa4.99□□□□□ -1.61
PAN1YIR006C BCP1Q06338 283 aa4.99□□□□□ -1.61
PAN1YIR006C AIM41Q12032 185 aa4.99□□□□□ -1.61
PAN1YIR006C CDC33P07260 213 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C CBP3P21560 335 aa4.98□□□□□ -1.61
PAN1YIR006C SMF1P38925 575 aa4.98□□□□□ -1.61
PAN1YIR006C MVP1P40959 511 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C FOL1P53848 824 aa4.98□□□□□ -1.61
PAN1YIR006C AIM33Q04516 312 aa4.98□□□□□ -1.61
PAN1YIR006C GTB1Q04924 702 aa4.98□□□□□ -1.61
PAN1YIR006C YPL191CQ08930 360 aa4.98□□□□□ -1.61
PAN1YIR006C RIO1Q12196 484 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C CYB2P00175 591 aa4.98□□□□□ -1.61
PAN1YIR006C SMI1P32566 505 aa4.98□□□□□ -1.61
PAN1YIR006C ECM32P32644 1121 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C PIN4P34217 668 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
PAN1YIR006C GRX7P38068 203 aa4.98□□□□□ -1.61
PAN1YIR006C RGD1P38339 666 aa4.98□□□□□ -1.61
PAN1YIR006C MIP6P38760 659 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C UBP6P43593 499 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C NOP9P47077 666 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C JIP5Q06214 492 aaPredicted RBP4.98□□□□□ -1.61
PAN1YIR006C MET6P05694 767 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C COQ1P18900 473 aa4.98□□□□□ -1.61
PAN1YIR006C RNR3P21672 869 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C CDC3P32457 520 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C KIC1P38692 1080 aa4.98□□□□□ -1.61
PAN1YIR006C SPC24Q04477 213 aa4.98□□□□□ -1.61
PAN1YIR006C HMI1Q12039 706 aa4.98□□□□□ -1.61
PAN1YIR006C NOT5Q12514 560 aaPredicted RBP4.98□□□□□ -1.61
PAN1YIR006C ZIP1P31111 875 aa4.98□□□□□ -1.61
PAN1YIR006C STE13P33894 931 aa4.98□□□□□ -1.61
PAN1YIR006C MCD4P36051 919 aa4.98□□□□□ -1.61
PAN1YIR006C MIC19P43594 170 aa4.98□□□□□ -1.61
PAN1YIR006C ZIP2P53061 704 aa4.98□□□□□ -1.61
PAN1YIR006C YGR273CP53329 174 aa4.98□□□□□ -1.61
PAN1YIR006C YMR226CQ05016 267 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C YDL124WQ07551 312 aaKnown RBP4.98□□□□□ -1.61
PAN1YIR006C NOC3Q07896 663 aaPredicted RBP4.98□□□□□ -1.61
PAN1YIR006C RSF2P46974 1380 aa4.97□□□□□ -1.61
PAN1YIR006C EFB1P32471 206 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C PET10P36139 283 aa4.97□□□□□ -1.61
PAN1YIR006C ISW1P38144 1129 aa4.97□□□□□ -1.61
PAN1YIR006C CBR1P38626 284 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C KAP114P53067 1004 aa4.97□□□□□ -1.61
PAN1YIR006C LGE1Q02796 332 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C NUR1Q12066 484 aa4.97□□□□□ -1.61
PAN1YIR006C SEC39Q12745 709 aa4.97□□□□□ -1.61
PAN1YIR006C PRI1P10363 409 aa4.97□□□□□ -1.61
PAN1YIR006C HSC82P15108 705 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C HIS2P38635 335 aa4.97□□□□□ -1.61
PAN1YIR006C LIN1P38852 340 aaPredicted RBP4.97□□□□□ -1.61
PAN1YIR006C YNL011CP53980 444 aa4.97□□□□□ -1.61
PAN1YIR006C ERG5P54781 538 aa4.97□□□□□ -1.61
PAN1YIR006C CRF1Q04930 467 aa4.97□□□□□ -1.61
PAN1YIR006C ENT2Q05785 613 aa4.97□□□□□ -1.61
PAN1YIR006C NUP188P52593 1655 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C MSH1P25846 959 aa4.97□□□□□ -1.61
PAN1YIR006C GCD6P32501 712 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C YKR078WP36158 585 aaKnown RBP4.97□□□□□ -1.61
PAN1YIR006C POP4P38336 279 aa4.97□□□□□ -1.61
PAN1YIR006C VTI1Q04338 217 aa4.97□□□□□ -1.61
PAN1YIR006C CWC2Q12046 339 aaPredicted RBP4.97□□□□□ -1.61
PAN1YIR006C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
PAN1YIR006C YJL206CP39529 758 aa4.96□□□□□ -1.61
PAN1YIR006C HUL4P40985 892 aa4.96□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms