RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C DLD3P39976 496 aaKnown RBP6.23□□□□□ -1.41
RPT6YGL048C LSC2P53312 427 aa6.23□□□□□ -1.41
RPT6YGL048C FOL1P53848 824 aa6.23□□□□□ -1.41
RPT6YGL048C ECM16Q04217 1267 aaKnown RBP6.23□□□□□ -1.41
RPT6YGL048C TMA64Q04600 565 aaKnown RBP6.23□□□□□ -1.41
RPT6YGL048C SSF2Q12153 453 aaPredicted RBP6.23□□□□□ -1.41
RPT6YGL048C SUT2Q12286 268 aa6.23□□□□□ -1.41
RPT6YGL048C RAD50P12753 1312 aa6.23□□□□□ -1.41
RPT6YGL048C CDC19P00549 500 aaKnown RBP6.22□□□□□ -1.41
RPT6YGL048C NUC1P08466 329 aa6.22□□□□□ -1.41
RPT6YGL048C RIT1P23796 513 aa6.22□□□□□ -1.41
RPT6YGL048C UTR2P32623 467 aa6.22□□□□□ -1.41
RPT6YGL048C BCS1P32839 456 aa6.22□□□□□ -1.41
RPT6YGL048C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
RPT6YGL048C TBS1P38114 1094 aa6.22□□□□□ -1.41
RPT6YGL048C LDH1P38139 375 aa6.22□□□□□ -1.41
RPT6YGL048C CRG1P38892 291 aaRIP-Chip data6.22□□□□□ -1.41not detected
RPT6YGL048C YGR125WP53273 1036 aa6.22□□□□□ -1.41
RPT6YGL048C BRE5P53741 515 aaKnown RBP6.22□□□□□ -1.41
RPT6YGL048C MYO5Q04439 1219 aaKnown RBP6.22□□□□□ -1.41
RPT6YGL048C LCB5Q06147 687 aaKnown RBP6.22□□□□□ -1.41
RPT6YGL048C ECM30Q06673 1274 aa6.22□□□□□ -1.41
RPT6YGL048C MET7Q08645 548 aa6.22□□□□□ -1.41
RPT6YGL048C MDM20Q12387 796 aaKnown RBP6.22□□□□□ -1.41
RPT6YGL048C SPT2P06843 333 aaPredicted RBP6.21□□□□□ -1.42
RPT6YGL048C VAS1P07806 1104 aaKnown RBP6.21□□□□□ -1.42
RPT6YGL048C TAF13P11747 167 aa6.21□□□□□ -1.42
RPT6YGL048C SRP54P20424 541 aaKnown RBP6.21□□□□□ -1.42
RPT6YGL048C GBP2P25555 427 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
RPT6YGL048C RGT1P32862 1170 aa6.21□□□□□ -1.42
RPT6YGL048C RER2P35196 286 aa6.21□□□□□ -1.42
RPT6YGL048C NOC2P39744 710 aaKnown RBP6.21□□□□□ -1.42
RPT6YGL048C YFL034WP43564 1073 aa6.21□□□□□ -1.42
RPT6YGL048C VPS30Q02948 557 aa6.21□□□□□ -1.42
RPT6YGL048C SPH1Q06160 661 aa6.21□□□□□ -1.42
RPT6YGL048C SPN1Q06505 410 aaPredicted RBP6.21□□□□□ -1.42
RPT6YGL048C YDL121CQ07541 149 aa6.21□□□□□ -1.42
RPT6YGL048C YOR131CQ12486 218 aa6.21□□□□□ -1.42
RPT6YGL048C SAM1P10659 382 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C RDS2P19541 446 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C HEM3P28789 327 aa6.2□□□□□ -1.42
RPT6YGL048C SEC20P28791 383 aa6.2□□□□□ -1.42
RPT6YGL048C SRP40P32583 406 aaPredicted RBP6.2□□□□□ -1.42
RPT6YGL048C SHP1P34223 423 aa6.2□□□□□ -1.42
RPT6YGL048C RRP14P36080 434 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C YKR018CP36114 725 aa6.2□□□□□ -1.42
RPT6YGL048C DBP7P36120 742 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C UIP5P36137 443 aa6.2□□□□□ -1.42
RPT6YGL048C SCS3P53012 380 aa6.2□□□□□ -1.42
RPT6YGL048C ENV11P53246 860 aa6.2□□□□□ -1.42
RPT6YGL048C UBP2Q01476 1272 aa6.2□□□□□ -1.42
RPT6YGL048C RPT6Q01939 405 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C BUL2Q03758 920 aaKnown RBP6.2□□□□□ -1.42
RPT6YGL048C SUE1Q06524 206 aa6.2□□□□□ -1.42
RPT6YGL048C PHR1P05066 565 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
RPT6YGL048C DAT1P13483 248 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C MIP1P15801 1254 aa6.19□□□□□ -1.42
RPT6YGL048C MAK31P23059 88 aa6.19□□□□□ -1.42
RPT6YGL048C YUR1P26725 428 aa6.19□□□□□ -1.42
RPT6YGL048C GAR1P28007 205 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C RPL8BP29453 256 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C KSP1P38691 1029 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C TOM71P38825 639 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C TPM2P40414 161 aa6.19□□□□□ -1.42
RPT6YGL048C CSM2P40465 213 aa6.19□□□□□ -1.42
RPT6YGL048C HOS4P40480 1083 aa6.19□□□□□ -1.42
RPT6YGL048C YPL034WQ03083 165 aa6.19□□□□□ -1.42
RPT6YGL048C TFC6Q06339 672 aa6.19□□□□□ -1.42
RPT6YGL048C OPT2Q06593 877 aa6.19□□□□□ -1.42
RPT6YGL048C UTP4Q06679 776 aaKnown RBP6.19□□□□□ -1.42
RPT6YGL048C GUD1Q07729 489 aa6.19□□□□□ -1.42
RPT6YGL048C ERP3Q12403 225 aa6.19□□□□□ -1.42
RPT6YGL048C YPR117WQ06116 2489 aa6.18□□□□□ -1.42
RPT6YGL048C PPG1P32838 368 aa6.18□□□□□ -1.42
RPT6YGL048C PEP12P32854 288 aa6.18□□□□□ -1.42
RPT6YGL048C BLI1P35727 113 aa6.18□□□□□ -1.42
RPT6YGL048C MCR1P36060 302 aaKnown RBP6.18□□□□□ -1.42
RPT6YGL048C GLY1P37303 387 aaKnown RBP6.18□□□□□ -1.42
RPT6YGL048C VPS45P38932 577 aa6.18□□□□□ -1.42
RPT6YGL048C FIR1P40020 876 aa6.18□□□□□ -1.42
RPT6YGL048C IES1P43579 692 aa6.18□□□□□ -1.42
RPT6YGL048C YJR107WP47145 328 aa6.18□□□□□ -1.42
RPT6YGL048C YGL039WP53183 348 aaKnown RBP6.18□□□□□ -1.42
RPT6YGL048C RNH70P53331 553 aa6.18□□□□□ -1.42
RPT6YGL048C HXT17P53631 564 aa6.18□□□□□ -1.42
RPT6YGL048C ECM23Q02710 187 aa6.18□□□□□ -1.42
RPT6YGL048C YMR321CQ04898 105 aa6.18□□□□□ -1.42
RPT6YGL048C DUS3Q06053 668 aaKnown RBP6.18□□□□□ -1.42
RPT6YGL048C HDA3Q06623 655 aa6.18□□□□□ -1.42
RPT6YGL048C PSK2Q08217 1101 aa6.18□□□□□ -1.42
RPT6YGL048C CLF1Q12309 687 aaPredicted RBP6.18□□□□□ -1.42
RPT6YGL048C PGA3Q12746 312 aaKnown RBP6.18□□□□□ -1.42
RPT6YGL048C CIC1P38779 376 aaKnown RBP6.17□□□□□ -1.42
RPT6YGL048C NDT80P38830 627 aa6.17□□□□□ -1.42
RPT6YGL048C YJR098CP47139 656 aa6.17□□□□□ -1.42
RPT6YGL048C NNF1P47149 201 aa6.17□□□□□ -1.42
RPT6YGL048C CTR1P49573 406 aa6.17□□□□□ -1.42
RPT6YGL048C RPL34AP87262 121 aaPredicted RBP6.17□□□□□ -1.42
RPT6YGL048C MDM1Q01846 1127 aa6.17□□□□□ -1.42
RPT6YGL048C SLD5Q03406 294 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 125.7 ms