RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W RPC53P25441 422 aa8.23□□□□□ -1.09
YRF1-1YDR545W CRG1P38892 291 aaRIP-Chip data8.23□□□□□ -1.09not detected
YRF1-1YDR545W SIT1P39980 628 aa8.23□□□□□ -1.09
YRF1-1YDR545W CUS1Q02554 436 aaPredicted RBP8.23□□□□□ -1.09
YRF1-1YDR545W BCD1P38772 366 aa8.23□□□□□ -1.09
YRF1-1YDR545W NUP60P39705 539 aa8.23□□□□□ -1.09
YRF1-1YDR545W INP52P50942 1183 aa8.23□□□□□ -1.09
YRF1-1YDR545W VPS16Q03308 798 aa8.23□□□□□ -1.09
YRF1-1YDR545W GPN2Q08726 347 aaPredicted RBP8.23□□□□□ -1.09
YRF1-1YDR545W BRR1Q99177 341 aaPredicted RBP8.23□□□□□ -1.09
YRF1-1YDR545W VPH2P32341 215 aa8.22□□□□□ -1.09
YRF1-1YDR545W RPN2P32565 945 aaKnown RBP8.22□□□□□ -1.09
YRF1-1YDR545W PDS1P40316 373 aaPredicted RBP8.22□□□□□ -1.09
YRF1-1YDR545W POB3Q04636 552 aaKnown RBP8.22□□□□□ -1.09
YRF1-1YDR545W TY4B-PA0A0B7P3V8 1104 aa8.22□□□□□ -1.09
YRF1-1YDR545W YKR078WP36158 585 aaKnown RBP8.22□□□□□ -1.09
YRF1-1YDR545W UBP15P50101 1230 aa8.22□□□□□ -1.09
YRF1-1YDR545W ATP25Q03153 612 aa8.22□□□□□ -1.09
YRF1-1YDR545W NGL3Q03210 505 aa8.22□□□□□ -1.09
YRF1-1YDR545W SVF1Q05515 481 aa8.22□□□□□ -1.09
YRF1-1YDR545W PIG1Q06216 648 aa8.22□□□□□ -1.09
YRF1-1YDR545W DAS2Q12084 232 aa8.22□□□□□ -1.09
YRF1-1YDR545W SUB1P54000 292 aaKnown RBP8.22□□□□□ -1.09
YRF1-1YDR545W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
YRF1-1YDR545W SSP2Q08646 371 aa8.21□□□□□ -1.09
YRF1-1YDR545W SGT2Q12118 346 aaKnown RBP8.21□□□□□ -1.09
YRF1-1YDR545W TIF5P38431 405 aaKnown RBP8.21□□□□□ -1.09
YRF1-1YDR545W FRA1Q07825 749 aa8.21□□□□□ -1.09
YRF1-1YDR545W RMP1Q12530 201 aa8.21□□□□□ -1.09
YRF1-1YDR545W URA1P28272 314 aaPredicted RBP8.21□□□□□ -1.1
YRF1-1YDR545W YBL055CP34220 418 aaPredicted RBP8.21□□□□□ -1.1
YRF1-1YDR545W RER2P35196 286 aa8.21□□□□□ -1.1
YRF1-1YDR545W SHE9Q04172 456 aa8.21□□□□□ -1.1
YRF1-1YDR545W SPO21Q12411 609 aa8.21□□□□□ -1.1
YRF1-1YDR545W YME1P32795 747 aa8.21□□□□□ -1.1
YRF1-1YDR545W UTP6Q02354 440 aaKnown RBP8.21□□□□□ -1.1
YRF1-1YDR545W NCA2Q12374 616 aa8.21□□□□□ -1.1
YRF1-1YDR545W MVD1P32377 396 aaKnown RBP8.21□□□□□ -1.1
YRF1-1YDR545W BEM4P39011 633 aa8.21□□□□□ -1.1
YRF1-1YDR545W YFL034WP43564 1073 aa8.21□□□□□ -1.1
YRF1-1YDR545W SDA1P53313 767 aaKnown RBP8.21□□□□□ -1.1
YRF1-1YDR545W ATG13Q06628 738 aa8.21□□□□□ -1.1
YRF1-1YDR545W YAP7Q08182 245 aa8.21□□□□□ -1.1
YRF1-1YDR545W SRV2P17555 526 aaKnown RBP8.2□□□□□ -1.1
YRF1-1YDR545W SWI4P25302 1093 aaKnown RBP8.2□□□□□ -1.1
YRF1-1YDR545W YBP2P53169 641 aa8.2□□□□□ -1.1
YRF1-1YDR545W RAT1Q02792 1006 aaKnown RBP8.2□□□□□ -1.1
YRF1-1YDR545W ECI1Q05871 280 aa8.2□□□□□ -1.1
YRF1-1YDR545W MSH5Q12175 901 aa8.2□□□□□ -1.1
YRF1-1YDR545W SWI6P09959 803 aa8.2□□□□□ -1.1
YRF1-1YDR545W ADH4P10127 382 aa8.2□□□□□ -1.1
YRF1-1YDR545W MAL31P38156 614 aa8.2□□□□□ -1.1
YRF1-1YDR545W ECM2P38241 364 aaKnown RBP8.2□□□□□ -1.1
YRF1-1YDR545W NAB3P38996 802 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
YRF1-1YDR545W URB2P47108 1174 aa8.2□□□□□ -1.1
YRF1-1YDR545W MRPL25P23369 157 aa8.2□□□□□ -1.1
YRF1-1YDR545W PHO87P25360 923 aa8.2□□□□□ -1.1
YRF1-1YDR545W PTH2P34222 208 aa8.2□□□□□ -1.1
YRF1-1YDR545W SPC42P36094 363 aa8.2□□□□□ -1.1
YRF1-1YDR545W KEX2P13134 814 aa8.2□□□□□ -1.1
YRF1-1YDR545W MSB1P21339 1137 aaKnown RBP8.2□□□□□ -1.1
YRF1-1YDR545W YNL193WP53870 558 aa8.2□□□□□ -1.1
YRF1-1YDR545W MGR3Q04472 501 aa8.2□□□□□ -1.1
YRF1-1YDR545W RPL24AP04449 155 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W VIP1Q06685 1146 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W BRF1P29056 596 aa8.19□□□□□ -1.1
YRF1-1YDR545W KIC1P38692 1080 aa8.19□□□□□ -1.1
YRF1-1YDR545W SET1P38827 1080 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W SCS2P40075 244 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W IRC8P47046 822 aa8.19□□□□□ -1.1
YRF1-1YDR545W AIM41Q12032 185 aa8.19□□□□□ -1.1
YRF1-1YDR545W TUF1P02992 437 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W CLB2P24869 491 aa8.19□□□□□ -1.1
YRF1-1YDR545W SEC20P28791 383 aa8.19□□□□□ -1.1
YRF1-1YDR545W REV7P38927 245 aa8.19□□□□□ -1.1
YRF1-1YDR545W MDJ2P42834 146 aa8.19□□□□□ -1.1
YRF1-1YDR545W TMA20P89886 181 aaPredicted RBP8.19□□□□□ -1.1
YRF1-1YDR545W PIF1P07271 859 aa8.19□□□□□ -1.1
YRF1-1YDR545W VMA2P16140 517 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W YCR051WP25631 222 aa8.19□□□□□ -1.1
YRF1-1YDR545W SAS3P34218 831 aa8.19□□□□□ -1.1
YRF1-1YDR545W ARI1P53111 347 aaKnown RBP8.19□□□□□ -1.1
YRF1-1YDR545W EEB1Q02891 456 aa8.19□□□□□ -1.1
YRF1-1YDR545W YKL091CP33324 310 aaKnown RBP8.18□□□□□ -1.1
YRF1-1YDR545W KES1P35844 434 aaKnown RBP8.18□□□□□ -1.1
YRF1-1YDR545W YBR062CP38239 180 aa8.18□□□□□ -1.1
YRF1-1YDR545W SSP1P38871 571 aa8.18□□□□□ -1.1
YRF1-1YDR545W SPC72P39723 622 aa8.18□□□□□ -1.1
YRF1-1YDR545W MET18P40469 1032 aa8.18□□□□□ -1.1
YRF1-1YDR545W PPX1P38698 397 aa8.18□□□□□ -1.1
YRF1-1YDR545W PSY2P40164 858 aa8.18□□□□□ -1.1
YRF1-1YDR545W KAP114P53067 1004 aa8.18□□□□□ -1.1
YRF1-1YDR545W SHE10P53075 577 aa8.18□□□□□ -1.1
YRF1-1YDR545W RCF1Q03713 159 aa8.18□□□□□ -1.1
YRF1-1YDR545W HSC82P15108 705 aaKnown RBP8.18□□□□□ -1.1
YRF1-1YDR545W XKS1P42826 600 aa8.18□□□□□ -1.1
YRF1-1YDR545W VID30P53076 958 aa8.18□□□□□ -1.1
YRF1-1YDR545W DON1Q05610 365 aa8.18□□□□□ -1.1
YRF1-1YDR545W KTR3P38130 404 aaPredicted RBP8.17□□□□□ -1.1
YRF1-1YDR545W TDA10P42938 290 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms