RNA–Protein interactions for RNA: YDR323C

PEP7, Transcript of Adaptor protein involved in vesicle-mediated vacuolar protein sorting, yeast

Gene PEP7, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP7	YDR323C	HEM13	P11353	328 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	RAD4	P14736	754 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	BAS1	P22035	811 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	MTC2	P34246	357 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	CRP1	P38845	465 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	SPO74	P45819	413 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	DAS1	P47005	663 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	AVT1	P47082	602 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	ENT3	P47160	408 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	CTH1	P47976	325 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	PEX8	P53248	589 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	EEB1	Q02891	456 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	EST2	Q06163	884 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	BRE4	Q07660	1125 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	YOR378W	Q08902	515 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	TY1A-GR1	Q12085	440 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	SLX4	Q12098	748 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	SGT2	Q12118	346 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	CLF1	Q12309	687 aa	Predicted RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	NOP58	Q12499	511 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	TY1A-OL	Q92392	440 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	DED1	P06634	604 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	MSM1	P22438	575 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	ARL1	P38116	183 aa	Known RBP	4.41	□□□□□ -1.7
PEP7	YDR323C	HSE1	P38753	452 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	SLS1	P42900	643 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	TYW3	P53177	273 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	NYV1	Q12255	253 aa		4.41	□□□□□ -1.7
PEP7	YDR323C	MPH2	P0CD99	609 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	SRM1	P21827	482 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	RAD51	P25454	400 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	RER2	P35196	286 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	MAE1	P36013	669 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	ADD66	P36040	267 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	HXT13	P39924	564 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	SNF7	P39929	240 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	SPF1	P39986	1215 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	DOT6	P40059	670 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	GCV1	P48015	400 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	NCE103	P53615	221 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	HXT17	P53631	564 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	HXT15	P54854	567 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	MEC3	Q02574	474 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	ROD1	Q02805	837 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	NAN1	Q02931	896 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.4	□□□□□ -1.71	not detected
PEP7	YDR323C	UTP5	Q04177	643 aa	Known RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	VTI1	Q04338	217 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	YSH1	Q06224	779 aa	Predicted RBP	4.4	□□□□□ -1.71
PEP7	YDR323C	AOS1	Q06624	347 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	BDF2	Q07442	638 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	YLL054C	Q12244	843 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	CEX1	Q12453	761 aa		4.4	□□□□□ -1.71
PEP7	YDR323C	CYC7	P00045	113 aa		4.39	□□□□□ -1.71
PEP7	YDR323C	TRP2	P00899	507 aa	Known RBP	4.39	□□□□□ -1.71
PEP7	YDR323C	LYP1	P32487	611 aa		4.39	□□□□□ -1.71
PEP7	YDR323C	ABZ1	P37254	787 aa	Predicted RBP	4.39	□□□□□ -1.71
PEP7	YDR323C	PAF1	P38351	445 aa		4.39	□□□□□ -1.71
PEP7	YDR323C	NEM1	P38757	446 aa		4.39	□□□□□ -1.71
PEP7	YDR323C	YMR074C	Q04773	145 aa		4.39	□□□□□ -1.71
PEP7	YDR323C	SAC3	P46674	1301 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	YEF3	P16521	1044 aa	Known RBP	4.38	□□□□□ -1.71
PEP7	YDR323C	MSB1	P21339	1137 aa	Known RBP	4.38	□□□□□ -1.71
PEP7	YDR323C	ANP1	P32629	500 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	YKL069W	P36088	180 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	REI1	P38344	393 aa	Predicted RBP	4.38	□□□□□ -1.71
PEP7	YDR323C	NUP82	P40368	713 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	YNL058C	P53947	316 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	IRC3	Q06683	689 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	ELG1	Q12050	791 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	RRI2	Q12348	645 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	RTP1	Q12751	981 aa		4.38	□□□□□ -1.71
PEP7	YDR323C	AGP1	P25376	633 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	MKK2	P32491	506 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	ELM1	P32801	640 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	YNR063W	P53749	607 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	RKM2	Q03942	479 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	YLR352W	Q06479	807 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	YPR172W	Q06608	200 aa		4.37	□□□□□ -1.71
PEP7	YDR323C	TMA7	Q3E764	64 aa	Known RBP	4.37	□□□□□ -1.71
PEP7	YDR323C	HOM3	P10869	527 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	SYP1	P25623	870 aa	Known RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	YKL222C	P35995	705 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	APL2	P36000	726 aa	Predicted RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	APE4	P38821	490 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	YHR218W	P38899	603 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	TAT2	P38967	592 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	SRB7	P47822	140 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	RSC1	P53236	928 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	BNI5	P53890	448 aa	Known RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	ERO1	Q03103	563 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	YLR225C	Q05948	407 aa	Known RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	VIP1	Q06685	1146 aa	Known RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	AVO1	Q08236	1176 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	LAP2	Q10740	671 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	CHD1	P32657	1468 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	PHO8	P11491	566 aa		4.36	□□□□□ -1.71
PEP7	YDR323C	GFD2	P25370	566 aa	Known RBP	4.36	□□□□□ -1.71
PEP7	YDR323C	SBA1	P28707	216 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms