RNA–Protein interactions for RNA: YDL054C

MCH1, Transcript of Protein with similarity to mammalian monocarboxylate permeases, yeast

Gene MCH1, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCH1	YDL054C	SUM1	P46676	1062 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	RPT6	Q01939	405 aa	Known RBP	7.04	□□□□□ -1.28
MCH1	YDL054C	MET6	P05694	767 aa	Known RBP	7.04	□□□□□ -1.28
MCH1	YDL054C	CDC6	P09119	513 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	PHO87	P25360	923 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	RPL8B	P29453	256 aa	Known RBP	7.04	□□□□□ -1.28
MCH1	YDL054C	TGL4	P36165	910 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	CCT5	P40413	562 aa	Known RBP	7.04	□□□□□ -1.28
MCH1	YDL054C	PCI8	P40512	444 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	ALG2	P43636	503 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	YGR117C	P53270	476 aa		7.04	□□□□□ -1.28
MCH1	YDL054C	PMA1	P05030	918 aa	Known RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	RPS6A	P0CX37	236 aa	Known RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	RPS6B	P0CX38	236 aa	Predicted RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	SRM1	P21827	482 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	RPN12	P32496	274 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	ELM1	P32801	640 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	RXT2	P38255	430 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	KEL1	P38853	1164 aa	Known RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	RSM25	P40496	264 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	ACS2	P52910	683 aa	Known RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	RSC1	P53236	928 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	YDR341C	Q05506	607 aa	Known RBP	7.03	□□□□□ -1.28
MCH1	YDL054C	DCS2	Q12123	353 aa		7.03	□□□□□ -1.28
MCH1	YDL054C	CDC19	P00549	500 aa	Known RBP	7.02	□□□□□ -1.29
MCH1	YDL054C	THS1	P04801	734 aa	Known RBP	7.02	□□□□□ -1.29
MCH1	YDL054C	SSA1	P10591	642 aa	Known RBP	7.02	□□□□□ -1.29
MCH1	YDL054C	GAL2	P13181	574 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.02	□□□□□ -1.29	not detected
MCH1	YDL054C	CBP3	P21560	335 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	RNR3	P21672	869 aa	Known RBP	7.02	□□□□□ -1.29
MCH1	YDL054C	MNN4	P36044	1178 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	YIR007W	P40566	764 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	FOL1	P53848	824 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	TIM50	Q02776	476 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	VPS30	Q02948	557 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	GIS4	Q04233	774 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	VMS1	Q04311	632 aa	Known RBP	7.02	□□□□□ -1.29
MCH1	YDL054C	TRS33	Q99394	268 aa		7.02	□□□□□ -1.29
MCH1	YDL054C	TUB2	P02557	457 aa	Known RBP	7.01	□□□□□ -1.29
MCH1	YDL054C	NUC1	P08466	329 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	PGI1	P12709	554 aa	Known RBP	7.01	□□□□□ -1.29
MCH1	YDL054C	HAP4	P14064	554 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	RGP1	P16664	663 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	SAM2	P19358	384 aa	Known RBP	7.01	□□□□□ -1.29
MCH1	YDL054C	SRP54	P20424	541 aa	Known RBP	7.01	□□□□□ -1.29
MCH1	YDL054C	RAD53	P22216	821 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	KRE33	P53914	1056 aa	Known RBP	7.01	□□□□□ -1.29
MCH1	YDL054C	GDE1	Q02979	1223 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	LAP2	Q10740	671 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	AIM44	Q99299	758 aa		7.01	□□□□□ -1.29
MCH1	YDL054C	CIT1	P00890	479 aa		7	□□□□□ -1.29
MCH1	YDL054C	HXK1	P04806	485 aa	Known RBP	7	□□□□□ -1.29
MCH1	YDL054C	CST26	P38226	397 aa		7	□□□□□ -1.29
MCH1	YDL054C	SKG3	Q06315	1026 aa		7	□□□□□ -1.29
MCH1	YDL054C	YPQ2	Q06328	317 aa		7	□□□□□ -1.29
MCH1	YDL054C	DSE3	Q08729	430 aa		7	□□□□□ -1.29
MCH1	YDL054C	GET3	Q12154	354 aa	Known RBP	7	□□□□□ -1.29
MCH1	YDL054C	TY1A-DR3	Q12441	440 aa		7	□□□□□ -1.29
MCH1	YDL054C	DDP1	Q99321	188 aa	Known RBP	7	□□□□□ -1.29
MCH1	YDL054C	GPA1	P08539	472 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	KRS1	P15180	591 aa	Known RBP	6.99	□□□□□ -1.29
MCH1	YDL054C	MCM4	P30665	933 aa	Known RBP	6.99	□□□□□ -1.29
MCH1	YDL054C	NPR3	P38742	1146 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	NIT1	P40447	199 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	ALA1	P40825	983 aa	Known RBP	6.99	□□□□□ -1.29
MCH1	YDL054C	ROG3	P43602	733 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	MDM1	Q01846	1127 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	EIS1	Q05050	843 aa	Known RBP	6.99	□□□□□ -1.29
MCH1	YDL054C	SMD2	Q06217	110 aa	Known RBP	6.99	□□□□□ -1.29
MCH1	YDL054C	SUE1	Q06524	206 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	YLR278C	Q05854	1341 aa		6.99	□□□□□ -1.29
MCH1	YDL054C	AHP1	P38013	176 aa	Known RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	RKM3	P38222	552 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	VPS45	P38932	577 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	YER130C	P39959	443 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	TY1A-MR1	Q04215	440 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	SGD1	Q06132	899 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	SSA4	P22202	642 aa	Known RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	PUP1	P25043	261 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	URA1	P28272	314 aa	Predicted RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	TOM71	P38825	639 aa	Known RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	ASE1	P50275	885 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	YGL138C	P53122	345 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	CTR9	P89105	1077 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	NAM8	Q00539	523 aa	Known RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	SSL2	Q00578	843 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	LCD1	Q04377	747 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	CLF1	Q12309	687 aa	Predicted RBP	6.98	□□□□□ -1.29
MCH1	YDL054C	PTC5	Q12511	572 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	NBL1	Q3E7Y6	73 aa		6.98	□□□□□ -1.29
MCH1	YDL054C	RFT1	P38206	574 aa	Predicted RBP	6.97	□□□□□ -1.29
MCH1	YDL054C	TPS3	P38426	1054 aa	Known RBP	6.97	□□□□□ -1.29
MCH1	YDL054C	ACA1	P39970	489 aa		6.97	□□□□□ -1.29
MCH1	YDL054C	YPT11	P48559	417 aa		6.97	□□□□□ -1.29
MCH1	YDL054C	ROM1	P53046	1155 aa		6.97	□□□□□ -1.29
MCH1	YDL054C	SNU71	P53207	620 aa	Known RBP	6.97	□□□□□ -1.29
MCH1	YDL054C	ETT1	Q08421	412 aa	Known RBP	6.97	□□□□□ -1.29
MCH1	YDL054C	TUS1	Q06412	1307 aa		6.96	□□□□□ -1.29
MCH1	YDL054C	CYT1	P07143	309 aa		6.96	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms