RNA–Protein interactions for RNA: YBR115C

LYS2, Transcript of Alpha aminoadipate reductase, yeast

Gene LYS2, Length 4,179 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LYS2	YBR115C	RRB1	Q04225	511 aa	Known RBP	4.85	□□□□□ -1.63
LYS2	YBR115C	ZIP1	P31111	875 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	KTR2	P33550	425 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	LTV1	P34078	463 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	PIM1	P36775	1133 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	SFB3	P38810	929 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	SGM1	P47166	707 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	MFB1	Q04922	465 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	PDR18	P53756	1333 aa		4.85	□□□□□ -1.63
LYS2	YBR115C	PUP2	P32379	260 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	YKL050C	P35736	922 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	RNT1	Q02555	471 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	SPB1	P25582	841 aa	Predicted RBP	4.84	□□□□□ -1.63
LYS2	YBR115C	TPD3	P31383	635 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	NIP1	P32497	812 aa	Known RBP	4.84	□□□□□ -1.63
LYS2	YBR115C	HXT10	P43581	546 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	SLD5	Q03406	294 aa		4.84	□□□□□ -1.63
LYS2	YBR115C	ERB1	Q04660	807 aa	Known RBP	4.84	□□□□□ -1.63
LYS2	YBR115C	SES1	P07284	462 aa	Known RBP	4.84	□□□□□ -1.64
LYS2	YBR115C	RRP43	P25359	394 aa	Predicted RBP	4.84	□□□□□ -1.64
LYS2	YBR115C	HCM1	P25364	564 aa		4.84	□□□□□ -1.64
LYS2	YBR115C	FAA3	P39002	694 aa		4.84	□□□□□ -1.64
LYS2	YBR115C	BBC1	P47068	1157 aa		4.84	□□□□□ -1.64
LYS2	YBR115C	NOG1	Q02892	647 aa	Known RBP	4.84	□□□□□ -1.64
LYS2	YBR115C	SEC2	P17065	759 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	IRC8	P47046	822 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	MDR1	P53258	950 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	YNL193W	P53870	558 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	YLR455W	Q06188	304 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	KEX2	P13134	814 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	PRP9	P19736	530 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	YBR287W	P38355	427 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	RCF1	Q03713	159 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	VIP1	Q06685	1146 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	RPN5	Q12250	445 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	NCB2	Q92317	146 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	YFL052W	P43551	465 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	RRP6	Q12149	733 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	UGA4	P32837	571 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	TVP23	P38962	199 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	SSP120	P39931	234 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	FAA4	P47912	694 aa	Known RBP	4.83	□□□□□ -1.64
LYS2	YBR115C	TAH18	Q12181	623 aa		4.83	□□□□□ -1.64
LYS2	YBR115C	OPI1	P21957	404 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	SSO1	P32867	290 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	APN2	P38207	520 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	YGR130C	P53278	816 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	MED2	Q12124	431 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	RUD3	Q12234	484 aa	Known RBP	4.82	□□□□□ -1.64
LYS2	YBR115C	COX6	P00427	148 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	MAK11	P20484	414 aa	Known RBP	4.82	□□□□□ -1.64
LYS2	YBR115C	RBK1	P25332	333 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	COQ8	P27697	501 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	SEG2	P34250	1132 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	CAJ1	P39101	391 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	MOB1	P40484	314 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	TPO2	P53283	614 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	ADY3	Q07732	790 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	APM4	Q99186	491 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	KIN82	P25341	720 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	IES5	P40060	125 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	TY4A-J	P47023	414 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	POB3	Q04636	552 aa	Known RBP	4.82	□□□□□ -1.64
LYS2	YBR115C	RKM4	Q12504	494 aa		4.82	□□□□□ -1.64
LYS2	YBR115C	CBF2	P32504	956 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	YBR238C	P38330	731 aa	Known RBP	4.81	□□□□□ -1.64
LYS2	YBR115C	SAP185	P40856	1058 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	ACF4	P47129	309 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	EMI2	Q04409	500 aa	Known RBP	4.81	□□□□□ -1.64
LYS2	YBR115C	AVO1	Q08236	1176 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	KRS1	P15180	591 aa	Known RBP	4.81	□□□□□ -1.64
LYS2	YBR115C	PET123	P17558	318 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	MSS51	P32335	436 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	SWI3	P32591	825 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	MLC1	P53141	149 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	ATH1	P48016	1211 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	LIF1	P53150	421 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	ENV11	P53246	860 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	PIL1	P53252	339 aa	Known RBP	4.81	□□□□□ -1.64
LYS2	YBR115C	RPN7	Q06103	429 aa	Known RBP	4.81	□□□□□ -1.64
LYS2	YBR115C	YPR097W	Q06839	1073 aa		4.81	□□□□□ -1.64
LYS2	YBR115C	BET2	P20133	325 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	RRP1	P35178	278 aa	Predicted RBP	4.8	□□□□□ -1.64
LYS2	YBR115C	RFC1	P38630	861 aa	Known RBP	4.8	□□□□□ -1.64
LYS2	YBR115C	DJP1	P40564	432 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	UTP5	Q04177	643 aa	Known RBP	4.8	□□□□□ -1.64
LYS2	YBR115C	GYL1	Q04322	720 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	HIF1	Q12373	385 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	DEP1	P31385	405 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	PHM8	P40025	321 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	HFI1	Q12060	488 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	SFI1	Q12369	946 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	ATG11	Q12527	1178 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
LYS2	YBR115C	ANP1	P32629	500 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	YHL050C	P38721	697 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	VPS45	P38932	577 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	SNF7	P39929	240 aa	Known RBP	4.8	□□□□□ -1.64
LYS2	YBR115C	YGL242C	P53066	181 aa		4.8	□□□□□ -1.64
LYS2	YBR115C	CSI1	Q04368	295 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 134.3 ms