RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C NMD2P38798 1089 aaKnown RBP10.09□□□□□ -0.79
PUP1YOR157C MMR1Q06324 491 aa10.09□□□□□ -0.79
PUP1YOR157C SEN1Q00416 2231 aaKnown RBP10.09□□□□□ -0.79
PUP1YOR157C FMP27Q06179 2628 aa10.08□□□□□ -0.8
PUP1YOR157C MET1P36150 593 aa10.08□□□□□ -0.8
PUP1YOR157C SLX1P38324 304 aa10.08□□□□□ -0.8
PUP1YOR157C OSH3P38713 996 aaKnown RBP10.08□□□□□ -0.8
PUP1YOR157C SGO1Q08490 590 aa10.08□□□□□ -0.8
PUP1YOR157C SRP54P20424 541 aaKnown RBP10.07□□□□□ -0.8
PUP1YOR157C UGA4P32837 571 aa10.07□□□□□ -0.8
PUP1YOR157C MAP2P38174 421 aaKnown RBP10.07□□□□□ -0.8
PUP1YOR157C YLR455WQ06188 304 aa10.07□□□□□ -0.8
PUP1YOR157C PIG1Q06216 648 aa10.07□□□□□ -0.8
PUP1YOR157C GPI13Q07830 1017 aa10.07□□□□□ -0.8
PUP1YOR157C IMG2P25642 146 aaPredicted RBP10.06□□□□□ -0.8
PUP1YOR157C MSS51P32335 436 aa10.06□□□□□ -0.8
PUP1YOR157C APN2P38207 520 aa10.06□□□□□ -0.8
PUP1YOR157C PSP2P50109 593 aaKnown RBP10.06□□□□□ -0.8
PUP1YOR157C CUS1Q02554 436 aaPredicted RBP10.06□□□□□ -0.8
PUP1YOR157C KTR1P27810 393 aaKnown RBP10.05□□□□□ -0.8
PUP1YOR157C HXT5P38695 592 aa10.05□□□□□ -0.8
PUP1YOR157C PUF6Q04373 656 aaKnown RBP10.05□□□□□ -0.8
PUP1YOR157C YLR422WQ06409 1932 aa10.04□□□□□ -0.8
PUP1YOR157C BET2P20133 325 aa10.04□□□□□ -0.8
PUP1YOR157C OPI1P21957 404 aa10.04□□□□□ -0.8
PUP1YOR157C COQ8P27697 501 aa10.04□□□□□ -0.8
PUP1YOR157C APM2P38700 605 aa10.04□□□□□ -0.8
PUP1YOR157C CSM2P40465 213 aa10.04□□□□□ -0.8
PUP1YOR157C BIO5P53744 561 aaKnown RBP10.04□□□□□ -0.8
PUP1YOR157C MUK1Q02866 612 aa10.04□□□□□ -0.8
PUP1YOR157C TVP38P36164 337 aa10.03□□□□□ -0.8
PUP1YOR157C RFS1P38234 210 aaKnown RBP10.03□□□□□ -0.8
PUP1YOR157C MDM1Q01846 1127 aa10.03□□□□□ -0.8
PUP1YOR157C ECM16Q04217 1267 aaKnown RBP10.03□□□□□ -0.8
PUP1YOR157C MYO5Q04439 1219 aaKnown RBP10.03□□□□□ -0.8
PUP1YOR157C ADK2P26364 225 aa10.02□□□□□ -0.81
PUP1YOR157C YKL097CP34245 136 aa10.02□□□□□ -0.81
PUP1YOR157C YFL052WP43551 465 aa10.02□□□□□ -0.81
PUP1YOR157C BRE1Q07457 700 aaKnown RBP10.02□□□□□ -0.81
PUP1YOR157C CLF1Q12309 687 aaPredicted RBP10.02□□□□□ -0.81
PUP1YOR157C RPL40AP0CH08 128 aaKnown RBP10.01□□□□□ -0.81
PUP1YOR157C RPL40BP0CH09 128 aaKnown RBP10.01□□□□□ -0.81
PUP1YOR157C MAK31P23059 88 aa10.01□□□□□ -0.81
PUP1YOR157C DID4P36108 232 aa10.01□□□□□ -0.81
PUP1YOR157C BUD16P39988 312 aa10.01□□□□□ -0.81
PUP1YOR157C GCV2P49095 1034 aa10.01□□□□□ -0.81
PUP1YOR157C RPL8AP17076 256 aaKnown RBP10□□□□□ -0.81
PUP1YOR157C CCC2P38995 1004 aa10□□□□□ -0.81
PUP1YOR157C HMF1P40037 129 aaKnown RBP10□□□□□ -0.81
PUP1YOR157C MGA2P40578 1113 aa10□□□□□ -0.81
PUP1YOR157C VIP1Q06685 1146 aaKnown RBP10□□□□□ -0.81
PUP1YOR157C OXR1Q08952 273 aa10□□□□□ -0.81
PUP1YOR157C UBC1P21734 215 aaKnown RBP9.99□□□□□ -0.81
PUP1YOR157C PWP2P25635 923 aaKnown RBP9.99□□□□□ -0.81
PUP1YOR157C ARP1P38696 384 aa9.99□□□□□ -0.81
PUP1YOR157C YEL025CP39991 1188 aa9.99□□□□□ -0.81
PUP1YOR157C HUL5P53119 910 aa9.99□□□□□ -0.81
PUP1YOR157C SNF1P06782 633 aaKnown RBP9.98□□□□□ -0.81
PUP1YOR157C PUP3P25451 205 aaKnown RBP9.98□□□□□ -0.81
PUP1YOR157C PAN5P38787 379 aa9.98□□□□□ -0.81
PUP1YOR157C YIR016WP40572 265 aa9.98□□□□□ -0.81
PUP1YOR157C YJL045WP47052 634 aa9.98□□□□□ -0.81
PUP1YOR157C SVF1Q05515 481 aa9.98□□□□□ -0.81
PUP1YOR157C HCR1Q05775 265 aaKnown RBP9.98□□□□□ -0.81
PUP1YOR157C WHI4Q07655 649 aaKnown RBP9.98□□□□□ -0.81
PUP1YOR157C DSE3Q08729 430 aa9.98□□□□□ -0.81
PUP1YOR157C ARP6Q12509 438 aa9.98□□□□□ -0.81
PUP1YOR157C SEC20P28791 383 aa9.97□□□□□ -0.81
PUP1YOR157C CLB5P30283 435 aa9.97□□□□□ -0.81
PUP1YOR157C RME1P32338 300 aaKnown RBP9.97□□□□□ -0.81
PUP1YOR157C PTC4P38089 393 aa9.97□□□□□ -0.81
PUP1YOR157C YRB30P53107 440 aaPredicted RBP9.97□□□□□ -0.81
PUP1YOR157C STB3Q12427 513 aa9.97□□□□□ -0.81
PUP1YOR157C SES1P07284 462 aaKnown RBP9.96□□□□□ -0.82
PUP1YOR157C TIF1P10081 395 aaKnown RBP9.96□□□□□ -0.82
PUP1YOR157C PEX1P24004 1043 aa9.96□□□□□ -0.82
PUP1YOR157C RER2P35196 286 aa9.96□□□□□ -0.82
PUP1YOR157C TPM2P40414 161 aa9.96□□□□□ -0.82
PUP1YOR157C MOB1P40484 314 aa9.96□□□□□ -0.82
PUP1YOR157C ASE1P50275 885 aa9.96□□□□□ -0.82
PUP1YOR157C SSF2Q12153 453 aaPredicted RBP9.96□□□□□ -0.82
PUP1YOR157C RRD2Q12461 358 aa9.96□□□□□ -0.82
PUP1YOR157C UBP11P36026 717 aa9.95□□□□□ -0.82
PUP1YOR157C SUL1P38359 859 aa9.95□□□□□ -0.82
PUP1YOR157C MDR1P53258 950 aa9.95□□□□□ -0.82
PUP1YOR157C YLR257WQ06146 321 aaKnown RBP9.95□□□□□ -0.82
PUP1YOR157C TFC6Q06339 672 aa9.95□□□□□ -0.82
PUP1YOR157C SPN1Q06505 410 aaPredicted RBP9.95□□□□□ -0.82
PUP1YOR157C APE1P14904 514 aa9.94□□□□□ -0.82
PUP1YOR157C GCS1P35197 352 aa9.94□□□□□ -0.82
PUP1YOR157C PEX28P38848 579 aa9.94□□□□□ -0.82
PUP1YOR157C MAF1P41910 395 aa9.94□□□□□ -0.82
PUP1YOR157C ACF4P47129 309 aa9.94□□□□□ -0.82
PUP1YOR157C SPP1Q03012 353 aa9.94□□□□□ -0.82
PUP1YOR157C SEC21P32074 935 aaKnown RBP9.93□□□□□ -0.82
PUP1YOR157C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
PUP1YOR157C UBX7P38349 436 aa9.93□□□□□ -0.82
PUP1YOR157C CRG1P38892 291 aaRIP-Chip data9.93□□□□□ -0.82not detected
PUP1YOR157C MMF1P40185 145 aaKnown RBP9.93□□□□□ -0.82
PUP1YOR157C ESL1P40456 1118 aa9.93□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms